DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12773 and Slc12a6

DIOPT Version :9

Sequence 1:NP_001284773.1 Gene:CG12773 / 31082 FlyBaseID:FBgn0024365 Length:712 Species:Drosophila melanogaster
Sequence 2:NP_001103100.1 Gene:Slc12a6 / 691209 RGDID:1311335 Length:1150 Species:Rattus norvegicus


Alignment Length:578 Identity:149/578 - (25%)
Similarity:241/578 - (41%) Gaps:154/578 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 GDE--DGDVAVTSFRQRTNNNTGGFVDLGNEYT-YAAGGHHASGANEIFAGEQGDKPWWRSNFFI 86
            |||  |.::|:......|.......::....|| ...|......|..|..|::  ||        
  Rat   125 GDEYFDKNLALFEEEMDTRPKVSSLLNRMANYTNLTQGAKEHEEAENITEGKK--KP-------- 179

  Fly    87 SQPVLFGTWDGVFTSCLINVFGVIVFLRSGWIVAQAGILNAVLIIF----CTVVIAL-VSVLSAI 146
            ::....||:.||:..||.|:||||:|||..|:|..||:|.|..|:.    ||::.|: :|.::..
  Rat   180 TKSPQMGTFMGVYLPCLQNIFGVILFLRLTWVVGTAGVLQAFAIVLICCCCTMLTAISMSAIATN 244

  Fly   147 GICERCRVESGGVYFLIAHTLGSRFGGALGLLYCFGQAVGCALNVMG------------------ 193
            |:     |.:||.||:|:..||..||||:||.:..|.....|:.::|                  
  Rat   245 GV-----VPAGGSYFMISRALGPEFGGAVGLCFYLGTTFAAAMYILGAIEIFLVYIVPRAAIFRS 304

  Fly   194 ---FGESMAGLVGLEGSKWAIRGFATAAVLLLGCINVAGVKWVIKLQFILLMILLISALDFMVG- 254
               ..||.|.|..:       |.:.||.::|:..:...||::|.|...:.|..:::|.|....| 
  Rat   305 DDALKESAAMLNNM-------RVYGTAFLVLMVLVVFIGVRYVNKFASLFLACVIVSILAIYAGA 362

  Fly   255 ----------------------------SFTSEASG----------------------------- 262
                                        |.|.|.:.                             
  Rat   363 IKSSFAPPHFPVCMLGNRTLSSRHLDICSKTKEVNNMTIPSKLWGFFCNSSQFFNATCDEYFVHN 427

  Fly   263 ------GFNGWASGNFVENLWPKY----------------------------DDGYSWFRVFGVF 293
                  |..|.|||...||||..|                            |...|:..:.|:|
  Rat   428 NVTSIQGIPGLASGIITENLWSNYLPKGEIIEKPSAKSSDVLGNLNHEYVLADITTSFTLLVGIF 492

  Fly   294 FPTVTGVLSGINMSGDLRAPSTDIPNGTLAAFGTSTFLYLVFVLFLGATCQRSFLYTDYMISVKV 358
            ||:|||:::|.|.||||:.....||.||:.|..|::|:||..|:..||..:...|...:..:||.
  Rat   493 FPSVTGIMAGSNRSGDLKDAQKSIPIGTILAILTTSFVYLSNVVLFGACIEGVVLRDKFGDAVKG 557

  Fly   359 SAV--------HFLLLAGIYVSSMSSCLGAMYGTPRVLQSIAKESVIPGIDILGKGRGPNKVPLY 415
            :.|        .::::.|.:.|:..:.|.::.|.||:||:|||:::||.:.:.|..:. |..|.:
  Rat   558 NLVVGTLSWPSPWVIVIGSFFSTCGAGLQSLTGAPRLLQAIAKDNIIPFLRVFGHSKA-NGEPTW 621

  Fly   416 AMAIVALVTVTFIIVGDINFLAPIVTMPFLLTYACIDYAYFALAQTFDIQEQREERFR 473
            |:.:.|.:....|::..::.:|||::|.||:.|..::.|  ...||.........|||
  Rat   622 ALLLTAAIAELGILIASLDLVAPILSMFFLMCYLFVNLA--CALQTLLRTPHWRPRFR 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12773NP_001284773.1 2a30 88..>456 CDD:273347 130/493 (26%)
Slc12a6NP_001103100.1 2a30 109..1150 CDD:273347 149/578 (26%)
SLC5-6-like_sbd 209..>360 CDD:294310 44/162 (27%)
SLC12 774..1150 CDD:281515
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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