DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12773 and NKCC

DIOPT Version :9

Sequence 1:NP_001284773.1 Gene:CG12773 / 31082 FlyBaseID:FBgn0024365 Length:712 Species:Drosophila melanogaster
Sequence 2:NP_730938.1 Gene:NKCC / 40663 FlyBaseID:FBgn0051547 Length:1068 Species:Drosophila melanogaster


Alignment Length:598 Identity:139/598 - (23%)
Similarity:245/598 - (40%) Gaps:175/598 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 GVFTSCLINVFGVIVFLRSGWIVAQAGILNAVLIIFCTVVIALVSVLSAIGICERCRVESGGVYF 161
            ||...||:|::||::|||..|:||::|||.:::||..:.|:.:::.||...|.....|:.|||||
  Fly   141 GVLIPCLLNIWGVMLFLRLSWVVAESGILQSLIIITISAVVCVITTLSLSAISTNGEVKGGGVYF 205

  Fly   162 LIAHTLGSRFGGALGLLYCFGQAVGCALNVMGFGESMAGLV----------GLEGSKWAIRGFAT 216
            :|:.:||..||.::|:::.|..||..::|.:||.||:..|:          |:...:  |.|..|
  Fly   206 IISRSLGPEFGASVGVVFAFANAVSASMNTIGFCESLNVLLKNNDLKIVDNGINDIR--IVGSIT 268

  Fly   217 AAVLLLGCINVAGVKWVIKLQFILLMILLISALDFMVGSF------TSEASGGFNGWASGNFVEN 275
            ..||:|.|  ..|::|..|.|..|::.::::..:|::|:.      ..:.|.||.|::.....||
  Fly   269 VLVLILIC--CVGMEWETKAQNFLIVTIVLAIFNFLIGAAIGPQGNEEQISRGFVGFSWATLKEN 331

  Fly   276 LWP--KYDDG--YSWFRVFGVFFPTVTGVLSGINMSGDLRAPSTDIPNGTLAAFGTSTFLYLVFV 336
            ...  :|.:|  :.:|.||.:|||:|||:.:|.|:.|||:.....||.||..:...|...|.:||
  Fly   332 FGSDYRYAEGVNHDFFSVFAIFFPSVTGIQAGANICGDLKDAGAAIPKGTFWSLLISMSSYALFV 396

  Fly   337 LFLGATCQRSF----------------------------LYTDYMISVKVSAVHFLLLAGIYVSS 373
            ||.|....|..                            |:..|.:..::|....|:.||.:.::
  Fly   397 LFAGGAAVRDASGIPADLVNGTIVSSELPCMATGNCTWGLFNSYEMMQEMSLWGPLIYAGCFAAT 461

  Fly   374 MSSCLGAMYGTPRVLQSIAKESVIPGIDILGKGRGPNKVPLYAMAIVALVTVTFIIVGDINFLAP 438
            :|:.|..:...||::|::..:.:.||:....|..|.:..|.....:...:|..|:::|::|.:||
  Fly   462 LSTALTNLLSVPRLVQALGIDQIYPGLIFFSKPYGKHGEPYRGYVLTFFITTGFLLIGELNLIAP 526

  Fly   439 IVTMPFLLTYACIDYAYFALAQTFDIQEQREERFRIQASSPSYETRRYGSVSDTGNDLDLLFPDR 503
            :::..:|.:||.|::..|                                               
  Fly   527 LISTFYLASYALINFCTF----------------------------------------------- 544

  Fly   504 VRHKNLQSPQNSPLHQTVPLEFDNEGPSTSNQAQSSERRTGHEADTTLAVEQAVAQAGVEQDQGD 568
                                                                             
  Fly   545 ----------------------------------------------------------------- 544

  Fly   569 EAEPIAPI--RPPIHSKTKNWYSGYCNRWASLLGAFTKLLVMLLVNWYYALTCFLVVFVVWFYVG 631
            .|..:.|:  ||...         |.|.|.||.|....:.:|.|:|:..|:..|.::|.::..|.
  Fly   545 HAAFVKPLGWRPTFK---------YYNAWLSLFGFAMCVAIMFLINYVAAIITFGIIFALYLVVM 600

  Fly   632 TANPAVKPGLTAE 644
            ...|....|.|.:
  Fly   601 YRKPEANWGSTTQ 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12773NP_001284773.1 2a30 88..>456 CDD:273347 118/406 (29%)
NKCCNP_730938.1 2a30 85..1068 CDD:273347 139/598 (23%)
DUF502 507..>643 CDD:294696 31/228 (14%)
SLC12 651..1068 CDD:281515
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2083
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11827
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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