DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12773 and kcc

DIOPT Version :9

Sequence 1:NP_001284773.1 Gene:CG12773 / 31082 FlyBaseID:FBgn0024365 Length:712 Species:Drosophila melanogaster
Sequence 2:NP_001286795.1 Gene:kcc / 37800 FlyBaseID:FBgn0261794 Length:1077 Species:Drosophila melanogaster


Alignment Length:748 Identity:162/748 - (21%)
Similarity:269/748 - (35%) Gaps:275/748 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SEGNGNGGRRTVDWQRFGLGGDEDGDVAVTSFRQRTNNNTGGFVDLGNEYTYAAG---------- 59
            ||.||     ||...:    .::.||:      .|...|....:| .|.|.|...          
  Fly    18 SEHNG-----TVHETK----NEDSGDI------HRAEENQKSSID-PNLYLYDDDLETRPHISTF 66

  Fly    60 -GHHASGANEIFAGEQGD-KPWWRSNFFISQPVLFGTWDGVFTSCLINVFGVIVFLRSGWIVAQA 122
             ...|:..|.|.|....| ||       .:.....||..|||..|:.|:||||:|:|..|:|..|
  Fly    67 ISSIANYENTIPAATDPDAKP-------AAPSARMGTLIGVFLPCIQNIFGVILFIRLTWVVGTA 124

  Fly   123 GILNAVLIIFCTVVIALVSVLSAIGICERCRVESGGVYFLIAHTLGSRFGGALGLLYCFGQAVGC 187
            |.:...||:.....:.:::.:|...|.....|.:||.||:|:.:||..||||:|:|:..|..:..
  Fly   125 GAVCGFLIVLTCCCVTMLTAISMSAIATNGVVPAGGSYFMISRSLGPEFGGAVGMLFYTGTTLAA 189

  Fly   188 ALNVMGFGESMAGLVGLEGSKWA----------------IRGFATAAVLLLGCINVAGVKWVIKL 236
            |:.::|..|    :|....:.||                .|.:.|..::.:|.|...|||:|.|.
  Fly   190 AMYIVGAVE----IVLTYMAPWASIFGDFTKDADAMYNNFRVYGTLLLIFMGLIVFLGVKFVNKF 250

  Fly   237 QFILLMILLISALDFMVGSF---------------------------TSEAS------------- 261
            ..:.|..:::|.:...||.|                           |.|.|             
  Fly   251 ATVALACVILSIIAVYVGIFDNIHGNEKLYMCVLGKRLLKDIPLENCTKEDSFLRDIYCPDGKCE 315

  Fly   262 -----------GGFNGWASGNFVENLWPKY-----------------------------DDGYSW 286
                       .|..|.|||.|.:|::|.:                             |...|:
  Fly   316 EYYLANNVTKVKGIKGLASGVFYDNIFPSFLEKGQFISYGKSAIDIENTSGESYNQIMADITTSF 380

  Fly   287 FRVFGVFFPTVTGVLSGINMSGDLRAPSTDIPNGTLAAFGTSTFLYLVFVLFLGATCQRSFLYTD 351
            ..:.|:|||:|||:::|.|.||||......||.||:.|..|::.:||..|:|...|.....|...
  Fly   381 TLLIGIFFPSVTGIMAGSNRSGDLADAQKSIPIGTICAILTTSTVYLSSVMFFAGTVDNLLLRDK 445

  Fly   352 YMISVKVSAV--------HFLLLAGIYVSSMSSCLGAMYGTPRVLQSIAKESVIPGIDILGKG-- 406
            :..|:....|        .:::|.|.::|::.:.|.::.|.||:||:||::.:||.:....|.  
  Fly   446 FGQSIGGKLVVANIAWPNQWVILIGSFLSTLGAGLQSLTGAPRLLQAIARDEIIPFLAPFAKSSK 510

  Fly   407 RGPNKVPLYAMAIVALVTVTFIIVGDINFLAPIVTMPFLLTYACIDYAYFALAQTFDIQEQREER 471
            ||.   |..|:.:..::....|::|:::.|||:::|.||:.|..::.|                 
  Fly   511 RGE---PTRALLLTIVICQCGILLGNVDLLAPLLSMFFLMCYGFVNLA----------------- 555

  Fly   472 FRIQASSPSYETRRYGSVSDTGNDLDLLFPDRVRHKNLQSPQNSPLHQTVPLEFDNEGPSTSNQA 536
                                                                             
  Fly   556 ----------------------------------------------------------------- 555

  Fly   537 QSSERRTGHEADTTLAVEQAVAQAGVEQDQGDEAEPIAPIRPPIHSKTKNW---YSGYCNRWA-S 597
                          .||:..:                         :|.||   :..|  .|: |
  Fly   556 --------------CAVQTLL-------------------------RTPNWRPRFKFY--HWSLS 579

  Fly   598 LLGAFTKLLVMLLVNWYYALTCFLVVFVVWFYV 630
            |:|....:.||::.:||:||....:..:::.|:
  Fly   580 LIGLTLCISVMIMTSWYFALIAMGMAIIIYKYI 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12773NP_001284773.1 2a30 88..>456 CDD:273347 124/473 (26%)
kccNP_001286795.1 2a30 49..1077 CDD:273347 151/701 (22%)
SLC12 674..1077 CDD:281515
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467891
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2083
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11827
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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