DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12773 and Slc12a1

DIOPT Version :9

Sequence 1:NP_001284773.1 Gene:CG12773 / 31082 FlyBaseID:FBgn0024365 Length:712 Species:Drosophila melanogaster
Sequence 2:NP_001257546.1 Gene:Slc12a1 / 25065 RGDID:3685 Length:1095 Species:Rattus norvegicus


Alignment Length:619 Identity:160/619 - (25%)
Similarity:258/619 - (41%) Gaps:165/619 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 GEQGDKPWWRSNFFISQPVLFGTWDGVFTSCLINVFGVIVFLRSGWIVAQAGILNAVLIIFCTVV 136
            |..||:........::..|.||...||...|::|::||::|:|..|||.:|||...||||..:.:
  Rat   153 GMPGDEQAENKEEDVTGVVKFGWVKGVLVRCMLNIWGVMLFIRLSWIVGEAGIGLGVLIILLSTM 217

  Fly   137 IALVSVLSAIGICERCRVESGGVYFLIAHTLGSRFGGALGLLYCFGQAVGCALNVMGFGESMAGL 201
            :..::.||...|.....|..||.|:||:.:||..|||::||::.|..||..|:.|:||.|::..|
  Rat   218 VTSITGLSTSAIATNGFVRGGGAYYLISRSLGPEFGGSIGLIFAFANAVAVAMYVVGFAETVVDL 282

  Fly   202 VGLEGSKWA-----IRGFATAAVLLLGCINVAGVKWVIKLQFILLMILLISALDFMVG----SFT 257
            :....|...     ||...:..|::|..|:|||::|..|.|.|||:||||:..:|.:|    |..
  Rat   283 LKESDSMMVDPTNDIRIIGSITVVILLGISVAGMEWEAKAQVILLVILLIAIANFFIGTVIPSNN 347

  Fly   258 SEASGGFNGWASGNFVENLWPKYDDGYSWFRVFGVFFPTVTGVLSGINMSGDLRAPSTDIPNGTL 322
            .:.|.||..:.:..|.||..|.:.:|..:|.||.:|||..||:|:|.|:||||..|...||.||:
  Rat   348 EKKSRGFFNYQASIFAENFGPSFTEGEGFFSVFAIFFPAATGILAGANISGDLEDPQDAIPRGTM 412

  Fly   323 AAFGTSTFLYLVFVLFLGA---------------------------------TCQRS----FLYT 350
            .|...:|..|:...:.:.|                                 .||..    .|..
  Rat   413 LAIFITTVAYIGVAICVAACVVRDATGSMNDTVVSGMNCNGSAACGLGYDFSRCQHEPCQYGLMN 477

  Fly   351 DYMISVKVSAVHFLLLAGIYVSSMSSCLGAMYGTPRVLQSIAKESVIPGIDILGKGRGPNKVPLY 415
            ::.:...||....|:.|||:.:::||.|.::...|:|.|::.|:::..|:....||.|.|..||.
  Rat   478 NFQVMSMVSGFGPLITAGIFSATLSSALASLVSAPKVFQALCKDNIFKGLQFFAKGYGKNNEPLR 542

  Fly   416 AMAIVALVTVTFIIVGDINFLAPIVTMPFLLTYACIDYAYFALAQTFDIQEQREERFRIQASSPS 480
            ...:..::.:.||::.::|.:|||::..||.:||.|:::.|..:               .|.||.
  Rat   543 GYFLTFVIAMAFILIAELNVIAPIISNFFLASYALINFSCFHAS---------------YAKSPG 592

  Fly   481 YETRRYGSVSDTGNDLDLLFPDRVRHKNLQSPQNSPLHQTVPLEFDNEGPSTSNQAQSSERRTGH 545
            :                                                                
  Rat   593 W---------------------------------------------------------------- 593

  Fly   546 EADTTLAVEQAVAQAGVEQDQGDEAEPIAPIRPPIHSKTKNWYSGYCNRWASLLGAFTKLLVMLL 610
                                           ||..         |..|.|.||.||.....||.:
  Rat   594 -------------------------------RPAY---------GIYNMWVSLFGAILCCAVMFV 618

  Fly   611 VNWYYALTCFLVVFVVWFYVGTANPAVKPGLTAE 644
            :||:.|:..:::...::.||....|.|..|.:.:
  Rat   619 INWWAAVITYVIELFLYIYVTYKKPDVNWGSSTQ 652

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12773NP_001284773.1 2a30 88..>456 CDD:273347 134/413 (32%)
Slc12a1NP_001257546.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 26..45
AA_permease_N 86..152 CDD:285588
2a30 100..1095 CDD:273347 160/619 (26%)
SLC12 690..1095 CDD:281515
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2083
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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