DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12773 and Slc12a4

DIOPT Version :9

Sequence 1:NP_001284773.1 Gene:CG12773 / 31082 FlyBaseID:FBgn0024365 Length:712 Species:Drosophila melanogaster
Sequence 2:NP_001240733.1 Gene:Slc12a4 / 20498 MGIID:1309465 Length:1087 Species:Mus musculus


Alignment Length:763 Identity:170/763 - (22%)
Similarity:278/763 - (36%) Gaps:282/763 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SEGNGNGGRR-------TVDWQRFGLGGD-EDGDVAV----TSFRQRTNNNTGGFVDLGNEYTYA 57
            |:|.|.|..|       .:|..|   |.| .|.::|:    ...|.:.::..|..|...| .|..
Mouse    37 SDGEGQGNHRENSPFLCPLDASR---GNDYYDRNLALFEEELDIRPKVSSLLGKLVSYTN-LTQG 97

  Fly    58 AGGHHASGANEIFAGEQGDKPWWRSNFFISQPVLFGTWDGVFTSCLINVFGVIVFLRSGWIVAQA 122
            |..|     .|..:||.|.:.       .::....||..||:..||.|:||||:|||..|:|..|
Mouse    98 AKEH-----EEAESGEGGRRR-------AAKAPSMGTLMGVYLPCLQNIFGVILFLRLTWMVGTA 150

  Fly   123 GILNAVLIIF----CTVVIAL-VSVLSAIGICERCRVESGGVYFLIAHTLGSRFGGALGLLYCFG 182
            |:|.|:||:.    ||::.|: :|.::..|:     |.:||.||:|:.:||..||||:||.:..|
Mouse   151 GVLQALLIVLICCCCTLLTAISMSAIATNGV-----VPAGGSYFMISRSLGPEFGGAVGLCFYLG 210

  Fly   183 QAVGCALNVMGFGESMAGLV----------GLEGSKWA----IRGFATAAVLLLGCINVAGVKWV 233
            .....|:.::|..|.:...:          |......|    :|.:.|..:.|:..:...|||:|
Mouse   211 TTFAAAMYILGAIEILLTYIAPPAAIFYPSGTHDMSSATLNNMRVYGTIFLTLMTLVVFVGVKYV 275

  Fly   234 IKLQFILLMILLISALDFMVG-------------------------------------------- 254
            .|...:.|..::||.|....|                                            
Mouse   276 NKFASLFLACVIISILSIYAGGIKSIFDPPVFPVCMLGNRTLSRDQFDICAKTVVVDNETVATRL 340

  Fly   255 --------SFTSEASG------------GFNGWASGNFVENLWPKY------------------- 280
                    :.|:::..            |..|.|:|...||||..|                   
Mouse   341 WTFFCHSPNLTADSCDPYFLLNNVTEIPGIPGAAAGVLQENLWSAYLEKGEVVEKHGLPSTDTLG 405

  Fly   281 -----------DDGYSWFRVFGVFFPTVTGVLSGINMSGDLRAPSTDIPNGTLAAFGTSTFLYLV 334
                       |...|:..:.|:|||:|||:::|.|.|||||.....||.||:.|..|::.:|..
Mouse   406 LKESLSLYVVADIATSFTVLVGIFFPSVTGIMAGSNRSGDLRDAQKSIPVGTILAIVTTSLVYFS 470

  Fly   335 FVLFLGATCQRSFLYTDYMISVKVSAV--------HFLLLAGIYVSSMSSCLGAMYGTPRVLQSI 391
            .|:..||..:...|...|...|..:.|        .::::.|.:.|:..:.|.::.|.||:||:|
Mouse   471 SVILFGACIEGVVLRDKYGDGVSRNLVVGTLAWPSPWVIVVGSFFSTCGAGLQSLTGAPRLLQAI 535

  Fly   392 AKESVIPGIDILGKGRGPNKVPLYAMAIVALVTVTFIIVGDINFLAPIVTMPFLLTYACIDYAYF 456
            ||:::||.:.:.|.|:. |..|.:|:.:.||:....|::..::.:|||::|.||:.|..::.|  
Mouse   536 AKDNIIPFLRVFGHGKA-NGEPTWALLLTALIAELGILIASLDMVAPILSMFFLMCYLFVNLA-- 597

  Fly   457 ALAQTFDIQEQREERFRIQASSPSYETRRYGSVSDTGNDLDLLFPDRVRHKNLQSPQNSPLHQTV 521
                                                                             
Mouse   598 ----------------------------------------------------------------- 597

  Fly   522 PLEFDNEGPSTSNQAQSSERRTGHEADTTLAVEQAVAQAGVEQDQGDEAEPIAPIRPPIHSKTKN 586
                                         .||:..:                         :|.|
Mouse   598 -----------------------------CAVQTLL-------------------------RTPN 608

  Fly   587 W---YSGYCNRWA-SLLGAFTKLLVMLLVNWYYALTCFLVVFVVWFYV 630
            |   :..|  .|. |.||....|.:|.:.:|||||...|:..:::.|:
Mouse   609 WRPRFKYY--HWTLSFLGMSLCLALMFVSSWYYALVAMLIAGMIYKYI 654

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12773NP_001284773.1 2a30 88..>456 CDD:273347 129/488 (26%)
Slc12a4NP_001240733.1 2a30 44..1087 CDD:273347 166/756 (22%)
SLC5-6-like_sbd 144..>305 CDD:294310 46/165 (28%)
SLC12 711..1087 CDD:281515
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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