DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12773 and Slc12a2

DIOPT Version :9

Sequence 1:NP_001284773.1 Gene:CG12773 / 31082 FlyBaseID:FBgn0024365 Length:712 Species:Drosophila melanogaster
Sequence 2:NP_033220.2 Gene:Slc12a2 / 20496 MGIID:101924 Length:1206 Species:Mus musculus


Alignment Length:604 Identity:165/604 - (27%)
Similarity:264/604 - (43%) Gaps:172/604 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 VLFGTWDGVFTSCLINVFGVIVFLRSGWIVAQAGILNAVLIIFCTVVIALVSVLSAIGICERCRV 154
            |.||...||...|::|::||::|:|..|||.||||..:|::|....|:..::.||...|.....|
Mouse   277 VKFGWIKGVLVRCMLNIWGVMLFIRLSWIVGQAGIGLSVVVIAMATVVTTITGLSTSAIATNGFV 341

  Fly   155 ESGGVYFLIAHTLGSRFGGALGLLYCFGQAVGCALNVMGFGESMAGLVGLEGSKWAIRGF----- 214
            ..||.|:||:.:||..||||:||::.|..||..|:.|:||.|::..|: .|.|...|...     
Mouse   342 RGGGAYYLISRSLGPEFGGAIGLIFAFANAVAVAMYVVGFAETVVELL-KEHSILMIDEINDIRI 405

  Fly   215 --ATAAVLLLGCINVAGVKWVIKLQFILLMILLISALDFMVGSFTSEAS---GGFNGWASGNFVE 274
              |...|:||| |:|||::|..|.|.:||:|||::..||::|:|.|..|   .||.|:.|..|.|
Mouse   406 IGAITVVILLG-ISVAGMEWEAKAQIVLLVILLLAIADFVIGTFISLESKKPKGFFGYKSEIFNE 469

  Fly   275 NLWPKYDDGYSWFRVFGVFFPTVTGVLSGINMSGDLRAPSTDIPNGTLAAFGTSTFLYLVFVLFL 339
            |..|.:.:..::|.||.:|||..||:|:|.|:||||..|.:.||.|||.|...:|.:|:...:.:
Mouse   470 NFGPDFREEETFFSVFAIFFPAATGILAGANISGDLADPQSAIPKGTLLAILITTVVYIGIAVSV 534

  Fly   340 G------------------------ATCQRSF-------------LYTDYMISVKVSAVHFLLLA 367
            |                        |.|:.:|             |..::.:...||....|:.|
Mouse   535 GSCVVRDATGNVNDTITTELTNCTSAACKLNFDFSYCESNTCSYGLMNNFQVMSMVSGFAPLISA 599

  Fly   368 GIYVSSMSSCLGAMYGTPRVLQSIAKESVIPGIDILGKGRGPNKVPLYAMAIVALVTVTFIIVGD 432
            ||:.:::||.|.::...|::.|::.|:::.|...:..||.|.|..||....:..|:.:.||::.:
Mouse   600 GIFSATLSSALASLVSAPKIFQALCKDNIYPAFQMFAKGYGKNNEPLRGYILTFLIALGFILIAE 664

  Fly   433 INFLAPIVTMPFLLTYACIDYAYFALAQTFDIQEQREERFRIQASSPSYETRRYGSVSDTGNDLD 497
            :|.:|||::..||.:||.|:::.|                                         
Mouse   665 LNVIAPIISNFFLASYALINFSVF----------------------------------------- 688

  Fly   498 LLFPDRVRHKNLQSPQNSPLHQTVPLEFDNEGPSTSNQAQSSERRTGHEADTTLAVEQAVAQAGV 562
                    |.:|                                                     
Mouse   689 --------HASL----------------------------------------------------- 692

  Fly   563 EQDQGDEAEPIAPIRPPIHSKTKNWYSG--YCNRWASLLGAFTKLLVMLLVNWYYALTCFLVVFV 625
                               :|:..|...  |.|.|.||:||....:||.::||:.||..:::|..
Mouse   693 -------------------AKSPGWRPAFKYYNMWISLIGAILCCIVMFVINWWAALLTYVIVLG 738

  Fly   626 VWFYVGTANPAVKPGLTAE 644
            ::.||....|.|..|.:.:
Mouse   739 LYIYVTYKKPDVNWGSSTQ 757

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12773NP_001284773.1 2a30 88..>456 CDD:273347 141/412 (34%)
Slc12a2NP_033220.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 144..188
AA_permease_N 196..257 CDD:285588
2a30 210..1206 CDD:273347 165/604 (27%)
SLC12 795..1206 CDD:281515
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 954..987
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2083
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.