DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MTPAP and Tent2

DIOPT Version :9

Sequence 1:NP_001259129.1 Gene:MTPAP / 31081 FlyBaseID:FBgn0024360 Length:612 Species:Drosophila melanogaster
Sequence 2:XP_038958452.1 Gene:Tent2 / 361878 RGDID:1306438 Length:510 Species:Rattus norvegicus


Alignment Length:361 Identity:86/361 - (23%)
Similarity:166/361 - (45%) Gaps:67/361 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 IEEQVQQLYEHTRLNELGIRMRFLAALQVQQAIAGMFP------------------------AAQ 213
            :.:|:.:|:|..:.....::.:.|...|:|:.|..:||                        :.:
  Rat   156 LSQQILELFETCQQQASDLKKKELCRAQLQREIQLLFPRTCAFSACLCCLFAPADVLLSSSASLE 220

  Fly   214 AQPF--GSSVNGFGRMGCDLDLILRFDSDMGAKIPLEAAVPSRLVYHTKENLSNGRSQTQRHMEC 276
            ::.|  |||:||||....|.||.|....:           |.....:.|....:..:...:|. |
  Rat   221 SRLFLVGSSLNGFGARSSDGDLCLVVKEE-----------PCFFQVNQKTEARHILTLVHKHF-C 273

  Fly   277 FGDMLHLFLPGVCHVRRILQARVPIIKYHHEHLDLEVDLSMSNLTGFYMSELLYMFGEMDPRVRP 341
                  ..|.|.....::::|:|||:|:..:...:|.||:::|..|...:.||..:..::.||||
  Rat   274 ------TRLSGYIERPQLIRAKVPIVKFRDKVSCVEFDLNVNNTVGIRNTFLLRTYAYLENRVRP 332

  Fly   342 LTFTIRRWAQTCGLTNPSPGRWISNFSLTCLVMFFLQQLRQPILPTIGALAKAAEPGDSRVTEDG 406
            |...|::||....:.:.|.|. :|::||..:|:.:||.|.:||||::..:..     :|..|...
  Rat   333 LVLVIKKWASHHEINDASRGT-LSSYSLVLMVLHYLQTLPEPILPSLQKIYP-----ESFSTSVQ 391

  Fly   407 INCTFTRNVDRLGFRSRNQSSLSELLLQFFEFY-SQFDFHNRAISLNEGKPLSKPD-----HSAM 465
            ::.......:...:.|:|:|||.:|||.|.::| ::||::.:.||:.|.|.:.:||     :..:
  Rat   392 LHLVHHAPCNVPPYLSKNESSLGDLLLGFLKYYATEFDWNTQMISVREAKAIPRPDDMEWRNKYI 456

  Fly   466 YIVNPLE-----------QLLNVSKNVSLEECERLR 490
            .:..|.:           |..::.|:..|:..:||:
  Rat   457 CVEEPFDGTNTARAVHEKQKFDMIKDQFLKSWQRLK 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MTPAPNP_001259129.1 NT_PAP_TUTase 193..333 CDD:143392 36/165 (22%)
PAP_assoc 427..477 CDD:281779 17/66 (26%)
Tent2XP_038958452.1 TRF4 <224..>494 CDD:227585 77/293 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5260
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.