DRSC/TRiP Functional Genomics Resources

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Protein Alignment MTPAP and Tent4a

DIOPT Version :9

Sequence 1:NP_001259129.1 Gene:MTPAP / 31081 FlyBaseID:FBgn0024360 Length:612 Species:Drosophila melanogaster
Sequence 2:XP_006227844.2 Gene:Tent4a / 306672 RGDID:1307356 Length:784 Species:Rattus norvegicus


Alignment Length:628 Identity:120/628 - (19%)
Similarity:216/628 - (34%) Gaps:193/628 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 RTYCIKHNASEAASPGRN----AGRPNYEEF-IGRHQRQAQCSIVVQVSSEKSYEELYNYCSSFG 75
            ||:....:.:..|.||..    ||.|...:| .||.:|:                   |..|::|
  Rat   145 RTFFSFADGAAHAHPGPRGPTPAGSPPQHQFHPGRRKRE-------------------NKASTYG 190

  Fly    76 SIMGAHHYCVRQDETLHYILLEYATSDEAAAAIGAGVTNGELS--GVPVRSPFLWFRAAGGGRRS 138
                           |:|:|    :...||...|.|....:.:  |.|.:|     ||     .|
  Rat   191 ---------------LNYLL----SGSRAATLSGGGGPGAQAARPGTPWKS-----RA-----YS 226

  Fly   139 PKLVANTAPALLSLDGTRQVDQRHLLGLLRGAADIEEQVQQLYEHTRLNELGIRMRFLAALQVQQ 203
            |                             |...:.|::...|...........||.....:::.
  Rat   227 P-----------------------------GIQGLHEEIIDFYNFMSPCPEEAAMRREVVKRIET 262

  Fly   204 AIAGMFPAAQAQPFGSSVNGFGRMGCDLDLILRFDSDMGAKIPLEAAVPSRLVYHTKENLSNGRS 268
            .:..::|:|..|.|||...|......|:||::....:......||.|:       .|.|::.   
  Rat   263 VVKDLWPSADVQIFGSFSTGLYLPTSDIDLVVFGKWERPPLQLLEQAL-------RKHNVAE--- 317

  Fly   269 QTQRHMECFGDMLHLFLPGVCHVRRILQARVPIIKYHHEHLDLEVDLSMSNLTGFYMSELLYMFG 333
                               .|.::.:.:|.|||||...:..:::||:|.:..||...:|.:..:.
  Rat   318 -------------------PCSIKVLDKATVPIIKLTDQETEVKVDISFNMETGVRAAEFIKNYM 363

  Fly   334 EMDPRVRPLTFTIRRWAQTCGLTNPSPGRWISNFSLTCLVMFFLQQLRQPILPTIGALAKAAEPG 398
            :....:..|...::::.....|.....| .||::||..:.:.|||     :.|.|          
  Rat   364 KKYSLLPYLILVLKQFLLQRDLNEVFTG-GISSYSLILMAISFLQ-----LHPRI---------- 412

  Fly   399 DSRVTEDGINCTFTRNVDRLGFRSRNQSSLSELLLQFFEFYSQ-FDFHNRAISLNEG-------- 454
            |:|                     |...:|..||::|||.|.: |::....|.:.||        
  Rat   413 DAR---------------------RADENLGMLLVEFFELYGRNFNYLKTGIRIKEGGAYIAKEE 456

  Fly   455 --KPLSKPDHSAMYIVNPLEQLLNVSKNVSLEECERLRI-EVRNAAWVLESEVEN---ASVPEGD 513
              |.::.....:|..:   |..|....:|.......::: :|.:.|:::.|...:   .|.|..|
  Rat   457 IMKAMTSGYRPSMLCI---EDPLLPGNDVGRSSYGAMQVKQVFDYAYIVLSHAVSPLARSYPNRD 518

  Fly   514 GQELSCGLLNLFKHPEKAVIRPNMFFK----PRMVEVSDL---FEQKEAGATSS---------ST 562
            .:.....::.:    .:.||....:.|    .|:|...||   .:.||...|.:         |:
  Rat   519 SESTLGRIIKV----TQEVIDYRRWIKEKWGSRIVPSPDLDNRIKIKERVTTCNGEQMQSREPSS 579

  Fly   563 PPTPAITYKSASVRQQVQSIKAATRSELKQLRGSGSSVPTSSP 605
            |.:..:|...:|.:.......|::.|.|     |||.:.:.:|
  Rat   580 PYSQRLTLSLSSPQLLSSGSSASSVSSL-----SGSDIDSDTP 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MTPAPNP_001259129.1 NT_PAP_TUTase 193..333 CDD:143392 30/139 (22%)
PAP_assoc 427..477 CDD:281779 15/60 (25%)
Tent4aXP_006227844.2 TRF4 232..>537 CDD:227585 71/377 (19%)
KLF8_12_N <620..>719 CDD:424081
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5260
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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