DRSC/TRiP Functional Genomics Resources

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Protein Alignment MTPAP and usip-1

DIOPT Version :10

Sequence 1:NP_569904.1 Gene:MTPAP / 31081 FlyBaseID:FBgn0024360 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_506056.1 Gene:usip-1 / 179670 WormBaseID:WBGene00014124 Length:662 Species:Caenorhabditis elegans


Alignment Length:491 Identity:107/491 - (21%)
Similarity:182/491 - (37%) Gaps:165/491 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 QDETLHYILLEYATSDEA------AAAIGAGVTNGELSGVPVRSPFLWFRAAGGGRRSPKLVANT 145
            ||:   :::|:..:.|||      :.|.|..:.|.::...|                        
 Worm    62 QDQ---FMILQMESIDEANRICHDSIAKGFAINNTKIVFTP------------------------ 99

  Fly   146 APALLSLDGTRQVD--------QRH-----LLGLLRGAADIEEQVQQLYEHTRLNELGIRMRFLA 197
               ||.|:|.|..|        |.|     ||.:|..|.     .|:|.|..::.|.|...    
 Worm   100 ---LLGLNGFRLQDAIDFMKTSQPHFNNDELLEVLTMAI-----CQELPERLKILEDGFSF---- 152

  Fly   198 ALQVQQAIAGMFPAAQAQPFGSSVNGFGRMG-CDLDLILRFDSDMGAKI-----PLEAAV--PSR 254
               ::|.::.:...:..:.|||..:...|.| .|:|:.:...|..|.::     ||...|  |..
 Worm   153 ---IEQGVSELIQNSACEMFGSFASPVRRNGYSDIDINVESVSAPGQRVSTNVRPLNEVVANPKC 214

  Fly   255 LVYH--TKENL-----------------SNGRSQTQRHMECFGDMLHLFLPGVCHVRRILQARVP 300
            |:.|  ||..|                 .|...:|:..|                  |.|.||.|
 Worm   215 LITHPLTKSELETYPQEEIIKILYRCFNENSAFKTKFEM------------------RFLPARTP 261

  Fly   301 IIKYHH---EHLDLEVDLSMSNLTGFYMSELLYMFGEMD----PRVRPLTFTIRRWAQTCGLTNP 358
            ||.:.:   |.:::..|||:.|......:.||:.|...|    .|::.....|..||::..|.: 
 Worm   262 IIVFKNIEVEGMNVSYDLSVHNQISVEKASLLHEFIVKDKSKGSRMKNAMMFIVHWAKSNKLLS- 325

  Fly   359 SPGRW----------ISNFSLTCLVMFFLQQLRQPILPTIGALAKAAEPGDSRVTE------DGI 407
              |.:          ::::.:..||:.|:|.....:  .:...||.    ||||.|      .|.
 Worm   326 --GDYPEEKLEVKTKLNSYIINQLVIHFVQAATNKV--HVNPQAKR----DSRVNEYNFDTLFGD 382

  Fly   408 NCTFTRNVDRLGFRSRNQSSLSELLLQFFEFYSQFDFHNRAI---SLNEGKPLSKP----DHSAM 465
            .|.|.|                    :.|::|:.|||.|:||   ...:.|.||..    :.|.:
 Worm   383 YCKFFR--------------------ELFKYYANFDFTNKAIYGKKAMQKKTLSSAHGGVEESPL 427

  Fly   466 YIVNPLEQLLNVSKNVSLEECERLRIEVRNAAWVLE 501
            .:::|::...|:|..|:.:..:.|...:|||.::|:
 Worm   428 MLMDPMDITHNISAKVTEDAVKLLNGLIRNALFILK 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MTPAPNP_569904.1 NT_PAP_TUTase 193..333 CDD:143392 36/169 (21%)
PAP_assoc 427..>461 CDD:427532 11/40 (28%)
usip-1NP_506056.1 NT_Pol-beta-like 142..297 CDD:472251 38/179 (21%)
PAP_assoc 382..437 CDD:427532 16/74 (22%)

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