DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp2A and Cd82

DIOPT Version :10

Sequence 1:NP_525037.1 Gene:Tsp2A / 31080 FlyBaseID:FBgn0024361 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_113985.2 Gene:Cd82 / 83628 RGDID:69070 Length:266 Species:Rattus norvegicus


Alignment Length:270 Identity:57/270 - (21%)
Similarity:112/270 - (41%) Gaps:64/270 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 GCV---KYTLFCFNIVAWMISTALFALTVWLRAEPGFNDWLRILE--AQSFYIGVYVLIGISIVM 76
            |||   ||.||.||::.:::...:....||:.|:.  :.::.:|:  :.|..:|.||.||:..:.
  Rat     4 GCVKVTKYFLFLFNLLFFILGAVILGFGVWILADK--SSFISVLQTSSSSLQVGAYVFIGVGAIT 66

  Fly    77 MAVSFLGCLSALMENTLALFVFVGTQVFGFIAIVA--GSAVLLQFSTI-------NSSLQPLLNV 132
            |.:.||||:.|:.|....|.::.   ||..:.::|  ...||..|:..       |:.:..:.|.
  Rat    67 MLMGFLGCIGAVNEVRCLLGLYF---VFLLLILIAQVTVGVLFYFNADKLKQEMGNTVMDIIQNY 128

  Fly   133 SLRGFVATSE-YTYSNYVLTMIQENIGCCGATGPWDYLDLRQPL---------PSSC-------- 179
            |:....:..| :.|       :|..:.|||...|.::  .|.|:         |.||        
  Rat   129 SVNASSSREEAWDY-------VQAQVKCCGWVSPSNW--TRNPVLKNSTKTTYPCSCEKTKEEDN 184

  Fly   180 ------------RDTVSGNA------FFNGCVDELTWFFEGKTGWIVALAMTLGLLNVICAVMSF 226
                        ..|.|.|:      ...||:::...:.:...|.::.:...:.::.::...:|.
  Rat   185 QLIVKKGFCESDNSTASENSPEDWPVHPEGCMEKAQAWLQENFGILLGVCAGVAVIELLGLFLSI 249

  Fly   227 VLVQAVKKEE 236
            .|.:.:..|:
  Rat   250 CLCRYIHSED 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp2ANP_525037.1 Tetraspanin 19..230 CDD:459767 54/260 (21%)
Cd82NP_113985.2 Tetraspanin 24..253 CDD:459767 47/242 (19%)
CD37_CD82_like_LEL 106..228 CDD:239413 21/130 (16%)

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