DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp2A and tspan10

DIOPT Version :10

Sequence 1:NP_525037.1 Gene:Tsp2A / 31080 FlyBaseID:FBgn0024361 Length:244 Species:Drosophila melanogaster
Sequence 2:XP_001339579.3 Gene:tspan10 / 799194 ZFINID:ZDB-GENE-041111-201 Length:347 Species:Danio rerio


Alignment Length:279 Identity:55/279 - (19%)
Similarity:101/279 - (36%) Gaps:80/279 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 VKYTLFCFNIVAWMISTALFALTVWLRAEPGFNDWLRILEAQSFY------IG---VYVLIGISI 74
            :||.|...|::...:..|...|.:|           .::..:||.      ||   :.:.:.:.:
Zfish    89 LKYLLISSNLLFTALGLATLVLGLW-----------GLINKESFAQEKISGIGTDPMLLFLFLGL 142

  Fly    75 VMMAVSFLGCLSALMEN-------TLALFVFVGTQVFGFIAIVAGSAVLLQFSTINSSLQPLLNV 132
            |:..:|..||:.||.||       :.|:|:.|..||...:|:.              |:|..:..
Zfish   143 VLALLSMTGCIGALRENMCLLRIFSAAVFLLVVAQVLAAVALF--------------SMQAQMED 193

  Fly   133 SLRGFVATSEYTYSN-----YVLTMIQENIGCCGAT--GPWD---YLDLRQP-------LPSSCR 180
            .||..:.|:...|.:     ::...||.::.||||.  ..|:   |.:...|       .||.|.
Zfish   194 YLRLGMLTAIVRYQDDLDLRFITDEIQTSLQCCGADTYRDWEINVYYNCSAPGVQACGVPPSCCI 258

  Fly   181 DTVSGNA----------------------FFNGCVDELTWFFEGKTGWIVALAMTLGLLNVICAV 223
            |.:....                      |..||:..:..:.|...|.||.:.:.|..:.::...
Zfish   259 DPLENGTVWNSQCGVGAQQLDEFSAQSVIFLGGCLGSVARWMEHNGGVIVTVVIVLLGIQILTLF 323

  Fly   224 MSFVLVQAVKKEEEQASNY 242
            ::..|:..::....|...|
Zfish   324 ITARLLHKIRWTRAQHQAY 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp2ANP_525037.1 Tetraspanin 19..230 CDD:459767 53/265 (20%)
tspan10XP_001339579.3 None

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