DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp2A and Tspan17

DIOPT Version :10

Sequence 1:NP_525037.1 Gene:Tsp2A / 31080 FlyBaseID:FBgn0024361 Length:244 Species:Drosophila melanogaster
Sequence 2:XP_006517477.1 Gene:Tspan17 / 74257 MGIID:1921507 Length:281 Species:Mus musculus


Alignment Length:270 Identity:68/270 - (25%)
Similarity:112/270 - (41%) Gaps:47/270 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GASDEQLEKQIGCV-KYTLFCFNIVAWMISTALFALTVWLRAEPGFNDWLRILEAQSFYIGVYVL 69
            |...:..:.::||. ||.||.||||.|::.....|:.:|...|.|....:..|........|::.
Mouse     3 GKHQQFQDPEVGCCGKYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNISALTDLGGLDPVWLF 67

  Fly    70 IGISIVMMAVSFLGCLSALMENTLAL---FVFVGTQVFGFIAIVAGSAVLLQFSTINSSLQPLLN 131
            :.:..||..:.|.||:.||.|||..|   .||:|. :| |:.:.||....:....|...|...:|
Mouse    68 VVVGGVMSVLGFAGCIGALRENTFLLKFFSVFLGL-IF-FLELAAGILAFVFKDWIRDQLNLFIN 130

  Fly   132 VSLRGFVATSEYTYSNYVLTMIQENIGCCGATGPWDY--------LDL-----RQPLPSSC--RD 181
            .:::.:  ..:....| ::...||...||||.||.|:        .||     |..:|.||  ||
Mouse   131 NNVKAY--RDDLDLQN-LIDFAQEYWSCCGARGPNDWNLNIYFNCTDLNPSRERCGVPFSCCVRD 192

  Fly   182 TV--------------------SGNAFFNGCVDELTWFFEGKTGWIVALAMTLGLLNV--ICAVM 224
            ..                    .|:.:..|||.:...:.:.....:..:.:.:.||.:  :|...
Mouse   193 PAEDVLNTQCGYDIRLKLELEQQGSIYTKGCVGQFEKWLQDNLIVVAGVLVGIALLQIFGLCLAQ 257

  Fly   225 SFVL-VQAVK 233
            :.|. ::|||
Mouse   258 NLVSDIKAVK 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp2ANP_525037.1 Tetraspanin 19..230 CDD:459767 62/252 (25%)
Tspan17XP_006517477.1 Tetraspanin 18..260 CDD:459767 61/246 (25%)
TM4SF9_like_LEL 115..235 CDD:239412 25/122 (20%)

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