DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp2A and TSPAN4

DIOPT Version :9

Sequence 1:NP_001188523.1 Gene:Tsp2A / 31080 FlyBaseID:FBgn0024361 Length:244 Species:Drosophila melanogaster
Sequence 2:XP_011518638.1 Gene:TSPAN4 / 7106 HGNCID:11859 Length:269 Species:Homo sapiens


Alignment Length:236 Identity:59/236 - (25%)
Similarity:89/236 - (37%) Gaps:45/236 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 KYTLFCFNIVAWMISTALFALTVWLRAEPG----FNDWLRILEAQSFYI--GVYVLIGISIVMMA 78
            ::.|..|...|.:....:..:.:||.|..|    .:.....|.|.:..|  |.:|        ||
Human    41 EHRLVSFLWPAQLGGCGVLGVGIWLAATQGSFATLSSSFPSLSAANLLIITGAFV--------MA 97

  Fly    79 VSFLGCLSALMENTLALFVFVGTQVFGFIAIVAGSAVLLQFST--INSSLQPLLNVSLRGFVATS 141
            :.|:|||.|:.||...|..|....:..|: :.|..|:|....|  |:...|..|...|..:    
Human    98 IGFVGCLGAIKENKCLLLTFFLLLLLVFL-LEATIAILFFAYTDKIDRYAQQDLKKGLHLY---- 157

  Fly   142 EYTYSNYVLT----MIQENIGCCGATGPWDYLDL----RQP------LPSSCRDTVSGNAFFNGC 192
             .|..|..||    :||.:..|||.:...|:.::    |.|      ...||.....|..:...|
Human   158 -GTQGNVGLTNAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSCCLEFSESCGLHAPGTWWKAPC 221

  Fly   193 VDEL-TWFFE-----GKTGWIVALAMTLGL---LNVICAVM 224
            .:.: .|..|     |..|...||...|||   :.:.|.|:
Human   222 YETVKVWLQENLLAVGIFGLCTALVQILGLTFAMTMYCQVV 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp2ANP_001188523.1 Tetraspannin 18..232 CDD:278750 59/236 (25%)
tetraspanin_LEL 116..204 CDD:239401 25/109 (23%)
TSPAN4XP_011518638.1 Tetraspannin 63..261 CDD:278750 55/211 (26%)
NET-5_like_LEL 136..233 CDD:239418 23/101 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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