DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp2A and PRPH2

DIOPT Version :10

Sequence 1:NP_525037.1 Gene:Tsp2A / 31080 FlyBaseID:FBgn0024361 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_000313.2 Gene:PRPH2 / 5961 HGNCID:9942 Length:346 Species:Homo sapiens


Alignment Length:272 Identity:53/272 - (19%)
Similarity:90/272 - (33%) Gaps:95/272 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 FNIVAWMISTALFALTVWLRAEPGFNDWLR----ILEAQSFYIGVYVLIGISIVMMAVSFLG--- 83
            |:::|.:|   :|:|.::|:.|      ||    ::.....:.....|||:.::....:.|.   
Human    26 FSVLAGII---IFSLGLFLKIE------LRKRSDVMNNSESHFVPNSLIGMGVLSCVFNSLAGKI 81

  Fly    84 CLSAL-----------MENTLALFVFVGTQVFGFIAIVAGSAVLLQFSTINSSLQPLLNVSLRGF 137
            |..||           ::..||:.|.....:|    :||....||:.|..|:..|.|.| .::.:
Human    82 CYDALDPAKYARWKPWLKPYLAICVLFNIILF----LVALCCFLLRGSLENTLGQGLKN-GMKYY 141

  Fly   138 --VATSEYTYSNYVLTMIQENIGCCGATGPWD----------YLD------------------LR 172
              ..|....:....:.|:|....|||..|..|          |||                  |.
Human   142 RDTDTPGRCFMKKTIDMLQIEFKCCGNNGFRDWFEIQWISNRYLDFSSKEVKDRIKSNVDGRYLV 206

  Fly   173 QPLPSSC------------------------RDTVSGNAFFNGCVDELTWFFEGKTG-------- 205
            ..:|.||                        ..|...|.:..||...|..::.....        
Human   207 DGVPFSCCNPSSPRPCIQYQITNNSAHYSYDHQTEELNLWVRGCRAALLSYYSSLMNSMGVVTLL 271

  Fly   206 -WIVALAMTLGL 216
             |:..:.:|:||
Human   272 IWLFEVTITIGL 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp2ANP_525037.1 Tetraspanin 19..230 CDD:459767 53/272 (19%)
PRPH2NP_000313.2 Tetraspanin 16..181 CDD:459767 37/168 (22%)
peripherin_like_LEL 120..262 CDD:239415 27/142 (19%)
Interaction with MREG. /evidence=ECO:0000250 341..346
Blue background indicates that the domain is not in the aligned region.

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