DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp2A and prph2a

DIOPT Version :10

Sequence 1:NP_525037.1 Gene:Tsp2A / 31080 FlyBaseID:FBgn0024361 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_571641.1 Gene:prph2a / 58085 ZFINID:ZDB-GENE-000616-8 Length:345 Species:Danio rerio


Alignment Length:282 Identity:52/282 - (18%)
Similarity:100/282 - (35%) Gaps:80/282 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LEKQIGCVK--YTLFCFNIVAWMISTALFALTVWLRAEPGFNDWLR----ILEAQSFYIGVYVLI 70
            |:|::...:  :.::.|:::|.::   :|::.::.:.|      ||    :::....:....:||
Zfish    10 LKKRVKLAQMLWLMYWFSVMAGVL---VFSMGLFFKIE------LRKRSELMDNNESHFVPNILI 65

  Fly    71 GISIVMMAVSFLG---CLSALMENTLALFVFVGTQ------VFGFIAIVAGSAVLLQFSTINSSL 126
            |:.::...::..|   |..:|..:..|.:..:.|.      ||.|:.||..:........:..:|
Zfish    66 GVGLLACCLNAFGGKVCYDSLDSSKYAKWKSIMTPFLICCLVFNFLLIVTAAMCFAMRIPLEFTL 130

  Fly   127 QPLLNVSLRGF--VATSEYTYSNYVLTMIQENIGCCGATGPWD----------YLD--------- 170
            ...|...::.:  ..|....|....|.::|....|||.....|          |||         
Zfish   131 AEGLKNGMKYYKDTDTPGRCYMKRTLDLMQMEFRCCGNNNYKDWFEIQWVSNRYLDFSAKEVKDR 195

  Fly   171 ---------LRQPLPSSCRD------------------------TVSGNAFFNGCVDELTWFFEG 202
                     |...:|.||.:                        |...|.:..||.|.|..::.|
Zfish   196 ISSNVDGKYLMDGVPFSCCNPSSPRPCIQQQITNNSAHYSYDHYTEDLNIWKRGCRDALVSYYGG 260

  Fly   203 KTGWIVALAMTLGLLNVICAVM 224
            ....|..|.:.:.||.  .|||
Zfish   261 MMNTIGVLVLLVTLLQ--SAVM 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp2ANP_525037.1 Tetraspanin 19..230 CDD:459767 50/275 (18%)
prph2aNP_571641.1 Tetraspanin 16..>167 CDD:459767 26/159 (16%)
peripherin_like_LEL 120..262 CDD:239415 24/141 (17%)

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