DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp2A and tspan3b

DIOPT Version :9

Sequence 1:NP_001188523.1 Gene:Tsp2A / 31080 FlyBaseID:FBgn0024361 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_001076335.1 Gene:tspan3b / 569864 ZFINID:ZDB-GENE-070424-42 Length:253 Species:Danio rerio


Alignment Length:245 Identity:49/245 - (20%)
Similarity:96/245 - (39%) Gaps:53/245 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 QIGCV--KYTLFCFNIVAWMISTALFALTVWLRAEPGFNDWLRILEAQSFYIGVYVLIGISIVMM 77
            |.|.:  |..|...|::.|..:..|..:..::...  ::|:....|....:|...|:|.:..::.
Zfish     3 QCGVISSKTVLVFLNLIFWAAAGILCYIGAYVFIT--YDDYDHFFEDIYTFIPAMVIIAVGTLLF 65

  Fly    78 AVSFLGCLSALMENTLALFVFVGTQVFGF----IAIVAGSAVLLQF-STINSSLQPLLNVSLRGF 137
            .:.|:||.:.:.|:...|..|....:..|    :.:|.|.....:. :.:|.|:|.:.|      
Zfish    66 VIGFIGCCATIRESRCGLVTFSAVLLLVFATEVVVVVLGYIYRAKVEAVVNHSIQKVYN------ 124

  Fly   138 VATSEYTYSN-----YVLTMIQENIGCCGATGPWDYLDL-------RQPLP-SSCRDTVS----- 184
                ||..:|     ..:..:|..:.|||.....|:::.       ...:| |.|:.|:|     
Zfish   125 ----EYKGTNTDAPSRAIDYVQRQLHCCGIHNYSDWMNTHWFIESKNNSVPVSCCKPTISNRTGT 185

  Fly   185 ----GNAFFNGCVDELTWFFEGKTGWIVALAMTLGLLNVICAVMSFVLVQ 230
                |:.:..||  |:          :|...:...:|.||.|.::|..:|
Zfish   186 LMRPGDLYPEGC--EV----------LVVKKLKDIMLYVILAALTFAAIQ 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp2ANP_001188523.1 Tetraspannin 18..232 CDD:278750 47/242 (19%)
tetraspanin_LEL 116..204 CDD:239401 21/110 (19%)
tspan3bNP_001076335.1 Tetraspannin 10..237 CDD:278750 47/238 (20%)
Tweety_N <58..>94 CDD:299916 7/35 (20%)
TM4SF8_like_LEL 104..209 CDD:239416 23/126 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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