DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp2A and tspan3a

DIOPT Version :10

Sequence 1:NP_525037.1 Gene:Tsp2A / 31080 FlyBaseID:FBgn0024361 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_001020709.1 Gene:tspan3a / 565579 ZFINID:ZDB-GENE-030131-7787 Length:253 Species:Danio rerio


Alignment Length:236 Identity:48/236 - (20%)
Similarity:93/236 - (39%) Gaps:48/236 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 KYTLFCFNIVAWMISTALFALTVWLRAEPGFNDWLRILEAQSFYIGVYVLIGISIVMMAVSFLGC 84
            |..|...|::.|..:..|..:..::...  ::|:....|.....|...|:|.:..::..:..:||
Zfish    10 KTVLVFLNLIFWAAAGILCYVGAYVFIT--YDDYDHFFEDVYTLIPAVVIIAVGALLFIIGLIGC 72

  Fly    85 LSALMENTLALFVFVGTQVFGFIAIVAGSAVLLQF-------STINSSLQPLLNVSLRGFVATSE 142
            .:.:.|:...|..||...:..|:..|.  .|:|.:       ..:|.|:|.:.|          |
Zfish    73 CATIRESRCGLATFVIILMLVFVTEVV--VVVLGYIYRAKVEDEVNHSIQKVYN----------E 125

  Fly   143 YTYSN-----YVLTMIQENIGCCGATGPWDYLDLR---------QPLPSSCRDTVS--------- 184
            |..:|     ..:..:|..:.|||.|...|:.:.|         .|| |.|:..||         
Zfish   126 YNGTNTDAPSRAIDYVQRQLHCCGITNFADWRNTRWFKESKNNSVPL-SCCKPNVSNCTGSLLHP 189

  Fly   185 GNAFFNGCVDELTWFFEGKTGWIVALAMT---LGLLNVICA 222
            |:.:..||.:.:....:....:::..|:|   :.:|.::||
Zfish   190 GDLYPEGCEELVVKKLKEIMMYVIWAALTFAAIQMLGMLCA 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp2ANP_525037.1 Tetraspanin 19..230 CDD:459767 48/236 (20%)
tspan3aNP_001020709.1 Tetraspanin 9..235 CDD:459767 48/236 (20%)
TM4SF8_like_LEL 104..210 CDD:239416 23/116 (20%)

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