DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp2A and cd9

DIOPT Version :9

Sequence 1:NP_001188523.1 Gene:Tsp2A / 31080 FlyBaseID:FBgn0024361 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_001016989.1 Gene:cd9 / 549743 XenbaseID:XB-GENE-949525 Length:228 Species:Xenopus tropicalis


Alignment Length:251 Identity:69/251 - (27%)
Similarity:105/251 - (41%) Gaps:60/251 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 IGCVKYTLFCFNIVAWMISTALFALTVWLRAEPGFNDWLRILEAQ----SFYIGVYVLIGISIVM 76
            |.|:||.||.||.:.|:..||:..:.:|||.:|   ....:.||.    :||.|||:|||...:|
 Frog     7 IKCIKYLLFAFNFIFWLAGTAVLGIGLWLRFDP---QTKAMFEADQNTGAFYTGVYILIGAGALM 68

  Fly    77 MAVSFLGCLSALMENTLALFVFVGTQVFGFIAIVAG---SAVLLQFSTINSSLQPLLNVSLRGFV 138
            |.|.||||..|:.|:...|.:|     |.|:.::..   :|.:..|:..:..:.     .|:.|.
 Frog    69 MLVGFLGCCGAIQESECMLGLF-----FAFLLVIFAVEIAAGIWGFTNKDKVVD-----ELKTFY 123

  Fly   139 ATSEYTYSNYV----------LTMIQENIGCCGATGPWDYLDLRQPLPSSCRDTVSGNAFFNGCV 193
               :.||:.|:          |..|...:.|||.||         .|.::..|....|....|.:
 Frog   124 ---KDTYTKYMKSNDNALKDTLKAIHLALNCCGMTG---------VLEATVTDICPNNQGIVGAL 176

  Fly   194 ----------DELTWFFE--GKTGWIVALAMTLGLLNVICAVMSFVLVQAVKKEEE 237
                      |..|..|.  |..|..:|:.|..|:      :.|.||..|::...|
 Frog   177 SAQSCPAAIEDVFTTKFHIVGAVGIGIAVIMIFGM------IFSMVLCCAIRNNRE 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp2ANP_001188523.1 Tetraspannin 18..232 CDD:278750 66/242 (27%)
tetraspanin_LEL 116..204 CDD:239401 21/109 (19%)
cd9NP_001016989.1 Tetraspannin 10..217 CDD:366035 63/237 (27%)
CD9_LEL 109..193 CDD:239405 19/100 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1205716at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X522
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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