DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp2A and cd9

DIOPT Version :10

Sequence 1:NP_525037.1 Gene:Tsp2A / 31080 FlyBaseID:FBgn0024361 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_001016989.1 Gene:cd9 / 549743 XenbaseID:XB-GENE-949525 Length:228 Species:Xenopus tropicalis


Alignment Length:251 Identity:69/251 - (27%)
Similarity:105/251 - (41%) Gaps:60/251 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 IGCVKYTLFCFNIVAWMISTALFALTVWLRAEPGFNDWLRILEAQ----SFYIGVYVLIGISIVM 76
            |.|:||.||.||.:.|:..||:..:.:|||.:|   ....:.||.    :||.|||:|||...:|
 Frog     7 IKCIKYLLFAFNFIFWLAGTAVLGIGLWLRFDP---QTKAMFEADQNTGAFYTGVYILIGAGALM 68

  Fly    77 MAVSFLGCLSALMENTLALFVFVGTQVFGFIAIVAG---SAVLLQFSTINSSLQPLLNVSLRGFV 138
            |.|.||||..|:.|:...|.:|     |.|:.::..   :|.:..|:..:..:.     .|:.|.
 Frog    69 MLVGFLGCCGAIQESECMLGLF-----FAFLLVIFAVEIAAGIWGFTNKDKVVD-----ELKTFY 123

  Fly   139 ATSEYTYSNYV----------LTMIQENIGCCGATGPWDYLDLRQPLPSSCRDTVSGNAFFNGCV 193
               :.||:.|:          |..|...:.|||.||         .|.::..|....|....|.:
 Frog   124 ---KDTYTKYMKSNDNALKDTLKAIHLALNCCGMTG---------VLEATVTDICPNNQGIVGAL 176

  Fly   194 ----------DELTWFFE--GKTGWIVALAMTLGLLNVICAVMSFVLVQAVKKEEE 237
                      |..|..|.  |..|..:|:.|..|:      :.|.||..|::...|
 Frog   177 SAQSCPAAIEDVFTTKFHIVGAVGIGIAVIMIFGM------IFSMVLCCAIRNNRE 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp2ANP_525037.1 Tetraspanin 19..230 CDD:459767 65/239 (27%)
cd9NP_001016989.1 Tetraspanin 10..219 CDD:459767 65/239 (27%)
CD9_LEL 109..193 CDD:239405 19/100 (19%)

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