DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp2A and tspan5b

DIOPT Version :10

Sequence 1:NP_525037.1 Gene:Tsp2A / 31080 FlyBaseID:FBgn0024361 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_001008591.1 Gene:tspan5b / 494048 ZFINID:ZDB-GENE-041212-12 Length:271 Species:Danio rerio


Alignment Length:264 Identity:62/264 - (23%)
Similarity:118/264 - (44%) Gaps:51/264 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 QIG-CVKYTLFCFNIVAWMISTALFALTVWLRAEPGFNDWLRILEAQSFYIGVYVLIGISIVMMA 78
            ::| |:||.:|.|||:.|::..|..::.:|..:|.|....:..:.....:..|::.:.:..||..
Zfish    10 EVGCCIKYFIFGFNIIFWLLGVAFLSVALWAWSEKGVLSNISSITDLGGFDPVWLFLVVGGVMFV 74

  Fly    79 VSFLGCLSALMENTLAL---FVFVGTQVFGFIAIVAGSAVLLQFSTINSSLQPLLNVSLRGFVAT 140
            :.|.||:.||.||:..|   .||:|  :..|:.:.||....:....|...|:..:|.::|.:  .
Zfish    75 LGFAGCIGALRENSFLLKFFSVFLG--IIFFLELTAGVLAFVFKDWIKDQLKFFINNNIRAY--R 135

  Fly   141 SEYTYSNYVLTMIQENIGCCGATGPWDY-LDL------------RQPLPSSC------RDTVSGN 186
            .:....| ::...|:...||||.||.|: |::            :..:|.||      .|.::..
Zfish   136 DDIDLQN-LIDFTQDYWECCGAFGPEDWNLNIYFNCTDTNLSREKCGVPFSCCTKDPAEDVINTQ 199

  Fly   187 AFFN----------------GCVDEL-TWFFEGKTGWIVA-LAMTLGLLNV--ICAVMSFVL-VQ 230
            ..::                |||.:. .|..|..|  :|| :.:.:.||.:  ||...:.:. ::
Zfish   200 CGYDIRGKGDIEHKTFIHTKGCVPQFEKWLQENLT--VVAGIFIGIALLQIFGICLAQNLLSDIE 262

  Fly   231 AVKK 234
            ||::
Zfish   263 AVRE 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp2ANP_525037.1 Tetraspanin 19..230 CDD:459767 58/253 (23%)
tspan5bNP_001008591.1 Tetraspanin 15..258 CDD:459767 58/249 (23%)
TM4SF9_like_LEL 113..233 CDD:239412 23/122 (19%)

Return to query results.
Submit another query.