DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp2A and tspan5a

DIOPT Version :10

Sequence 1:NP_525037.1 Gene:Tsp2A / 31080 FlyBaseID:FBgn0024361 Length:244 Species:Drosophila melanogaster
Sequence 2:XP_068078345.1 Gene:tspan5a / 450026 ZFINID:ZDB-GENE-041010-145 Length:301 Species:Danio rerio


Alignment Length:257 Identity:59/257 - (22%)
Similarity:106/257 - (41%) Gaps:46/257 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 CVKYTLFCFNIVAWMISTALFALTVWLRAEPGFNDWLRILEAQSFYIGVYVLIGISIVMMAVSFL 82
            |:||.:|.|||:.|::..|...:.:|..:|.|....:..:.....:..|::.:.:..||..:.|.
Zfish    28 CIKYFIFGFNIIFWLLGVAFLGIGLWAWSEKGVLSNISSITDLGGFDPVWLFLVVGGVMFILGFA 92

  Fly    83 GCLSALMENTLAL---FVFVGTQVFGFIAIVAGSAVLLQFSTINSSLQPLLNVSLRGFVATSEYT 144
            ||:.||.|||..|   .||:|  :..|:.:.||....:....|...|...:|.::|.:  ..:..
Zfish    93 GCIGALRENTFLLKFFSVFLG--IIFFLELTAGILAFVFKDWIKDQLNFFINNNIRAY--RDDID 153

  Fly   145 YSNYVLTMIQENIGCCGATG--PWD---YLDLRQPLPS--------SC------RDTVSGNAFFN 190
            ..| ::...||...||||.|  .|:   |.:.....||        ||      .|.::....::
Zfish   154 LQN-LIDFTQEYWECCGAFGADDWNLNIYFNCTDSNPSREKCGVPFSCCTKDPAEDVINTQCGYD 217

  Fly   191 ----------------GCVDELTWFFEGKTGWIVALAMTLGLLNV--ICAVMSFVL-VQAVK 233
                            |||.:...:.:.....:..:.:.:.||.:  ||...:.|. ::||:
Zfish   218 VRAKPDAEQKTYIHVKGCVPQFEKWLQDNLTVVAGIFIGIALLQIFGICLAQNLVSDIEAVR 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp2ANP_525037.1 Tetraspanin 19..230 CDD:459767 56/251 (22%)
tspan5aXP_068078345.1 Tetraspanin 29..272 CDD:459767 55/247 (22%)
TM4SF9_like_LEL 127..247 CDD:239412 22/122 (18%)

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