DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp2A and tspan36

DIOPT Version :9

Sequence 1:NP_001188523.1 Gene:Tsp2A / 31080 FlyBaseID:FBgn0024361 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_001002748.1 Gene:tspan36 / 437021 ZFINID:ZDB-GENE-040718-248 Length:243 Species:Danio rerio


Alignment Length:246 Identity:53/246 - (21%)
Similarity:98/246 - (39%) Gaps:42/246 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 KYTLFCFNIVAWMISTAL-FALTVWLRAEPGFNDWLRILEAQSFYIGVYVLIGISIVMMAVSFLG 83
            |..|...:::.|....|| :..:..:::...|.|:   :..:...|...::||:::||..:.|:|
Zfish     9 KTILLLLSLIFWAAGAALAYVGSYVIKSYNNFEDF---MSDRHTLIPAAIIIGVAVVMFIIGFVG 70

  Fly    84 CLSALMENT--LALFVFVGTQVFG--FIAIVAGSAVLLQFSTINSSLQPLLN-VSLRGFVATSEY 143
            |.:.|.|:.  |.||:.:...:|.  ..|.|.|   ::....|...|:..:| |.|:.....|| 
Zfish    71 CCATLRESKVGLGLFLIIIMLIFAAEVTAFVFG---IIYRGRIRGDLEKSMNDVFLKYDGLNSE- 131

  Fly   144 TYSNYVLTMIQENIGCCGATGPWD------YLDLRQPLPSSCRDTVSGNAFFNGCVDEL------ 196
               .:.:..:|..:.|||.....|      :......:|.||     ..|....|..:|      
Zfish   132 ---THAVDYLQSQLECCGVKNQTDWTLTSWFAQHNNTVPQSC-----CKANMTQCTGQLSQPDLL 188

  Fly   197 -TWFFEGKTGWIVALAMTLGLLNVI-CAVMSF-------VLVQAVKKEEEQ 238
             |...|.|...::...::..:|.:: .|::.|       |:....||.|.|
Zfish   189 NTQGCEAKLEQVLQDVLSYAMLVILGFAIIKFFGMLSVCVITCKSKKNEYQ 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp2ANP_001188523.1 Tetraspannin 18..232 CDD:278750 49/238 (21%)
tetraspanin_LEL 116..204 CDD:239401 20/101 (20%)
tspan36NP_001002748.1 TM4SF8_like_LEL 103..206 CDD:239416 22/114 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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