DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp2A and tspan18b

DIOPT Version :10

Sequence 1:NP_525037.1 Gene:Tsp2A / 31080 FlyBaseID:FBgn0024361 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_001002439.2 Gene:tspan18b / 436712 ZFINID:ZDB-GENE-040718-137 Length:258 Species:Danio rerio


Alignment Length:266 Identity:61/266 - (22%)
Similarity:113/266 - (42%) Gaps:44/266 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGIG-YGASDEQLEKQ-IGCVKYTLFCFNIVAWMISTALFALTVWLRAEP-GFNDWLRILEAQS- 61
            ||:| ..|....:|.. :.|:||.:|.||.:.::..:.|..:.||:..:| ||.:   |:.|.. 
Zfish     1 MGLGEASARGTSMEGDCLSCIKYLMFVFNFLIFLGGSFLLGVGVWVVVDPTGFRE---IVAANPL 62

  Fly    62 FYIGVYVLIGISIVMMAVSFLGCLSALMENTLALFVFVGTQVFGFIAIVAGSAVLLQFSTINSSL 126
            .:.|||:::.:..::..:.||||..|:.||...|..|....:..|:|.:|  |.:|.|.......
Zfish    63 LFTGVYIILAMGGMLFLLGFLGCCGAIRENKCLLLFFFMLILIIFLAELA--AAILAFIFREHLT 125

  Fly   127 QPLLNVSLR----GFVATSEYTYSNYVLTMIQENIGCCGATGPWDY-------LDLRQPLPSSC- 179
            :......|:    |:..|..:|.:   ...|.....|||...|.|:       ::..:.:|.:| 
Zfish   126 REYFTKELKKHYQGYNNTDVFTST---WNAIMNTFDCCGVNSPEDFEESIFRIINPSEMVPEACC 187

  Fly   180 --------------RDTVSGNAFF---NGCVDELTWFFE---GKTGWIVALAMTLGLLNVICAVM 224
                          .:.:||:..:   .||...:..:||   ...|.:..:.:|:.|..::.|:.
Zfish   188 RRNNHVGESGFSNREECLSGSMLYRNNKGCYSAVVDYFEMYIYVAGALAIVVLTIELFAMVFAMC 252

  Fly   225 SFVLVQ 230
            .|..:|
Zfish   253 LFRGIQ 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp2ANP_525037.1 Tetraspanin 19..230 CDD:459767 54/244 (22%)
tspan18bNP_001002439.2 Tetraspanin 21..255 CDD:459767 53/241 (22%)
uroplakin_I_like_LEL 118..229 CDD:239409 19/113 (17%)

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