DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp2A and tspan6

DIOPT Version :10

Sequence 1:NP_525037.1 Gene:Tsp2A / 31080 FlyBaseID:FBgn0024361 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_999939.1 Gene:tspan6 / 406802 ZFINID:ZDB-GENE-030131-5435 Length:251 Species:Danio rerio


Alignment Length:261 Identity:57/261 - (21%)
Similarity:95/261 - (36%) Gaps:70/261 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 QLEKQIGCVKYTLFCFNIVAWMISTALFALTVW----------LRAEPGFNDWLRILEAQSFYIG 65
            |.:..|.|:|..|..::::.|.....|.|:.||          :.:|.|.|             .
Zfish     9 QTKPVITCLKTFLISYSLIFWFTGVILLAVGVWGKVNLEFDLLVNSEHGTN-------------A 60

  Fly    66 VYVLIGISIVMMAVSFLGCLSALMENTLALFVFVGTQVFGFIA-IVAG-SAVLLQFSTINSSLQP 128
            .|||||...|::.....||.:....:...|.::....|..|:| :||| |..:.:..        
Zfish    61 PYVLIGTGAVIIIFGLFGCFATCRGSPWMLKLYAMFLVLVFLAELVAGISGFIFRHE-------- 117

  Fly   129 LLNVSLRGFVATSEYTYSNYV------LTMIQENIGCCGATG--PW---DYLDLRQPLPSSCRD- 181
             :...|:|....:|   |||:      |..||..:.|||...  .|   .|.: ::.:|.||.: 
Zfish   118 -IKAVLKGAYQKAE---SNYMGKDDEDLDRIQRTLQCCGEENYTSWANTTYFE-KEGIPKSCCNV 177

  Fly   182 TVSGN---------------AFFNGCVDELTWFFEGKTGWIVALAMTLGLLNVI-----CAVMSF 226
            |.|.|               .:..||...::...|...|.|..::..:....||     |.:..:
Zfish   178 TASVNCTSAELKDLKKADSVVYHQGCFSLMSTTMEANLGIIAGISFGIAFFQVIGIFLACCLSRY 242

  Fly   227 V 227
            :
Zfish   243 I 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp2ANP_525037.1 Tetraspanin 19..230 CDD:459767 54/253 (21%)
tspan6NP_999939.1 Tetraspanin 17..241 CDD:459767 54/249 (22%)
TM4SF2_6_like_LEL 112..215 CDD:239414 23/115 (20%)

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