DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp2A and cd9b

DIOPT Version :10

Sequence 1:NP_525037.1 Gene:Tsp2A / 31080 FlyBaseID:FBgn0024361 Length:244 Species:Drosophila melanogaster
Sequence 2:XP_068075677.1 Gene:cd9b / 406737 ZFINID:ZDB-GENE-040426-2768 Length:231 Species:Danio rerio


Alignment Length:239 Identity:62/239 - (25%)
Similarity:106/239 - (44%) Gaps:25/239 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ASDEQLEKQIGCVKYTLFCFNIVAWMISTALFALTVWLRAEPGFNDWLRILEAQS-FYIGVYVLI 70
            :|.||      |:||.:|.||.:.|:..|.:.|:.:|||.:....::......|: |..|||:||
Zfish     8 SSGEQ------CIKYIIFFFNFMLWLAGTGVLAVGLWLRFDAKTKEFFTAENGQTVFLTGVYILI 66

  Fly    71 GISIVMMAVSFLGCLSALMENTLALFVFVGTQVFGFIAIV------AGSAVLLQFSTINSSLQPL 129
            ....|||.|.||||..|:.|:...|.:|     |.|:.::      ||...|.....|.|.:|..
Zfish    67 VAGAVMMVVGFLGCCGAIKESACMLGLF-----FMFLLVIFAAEVAAGIWGLSNKDKIVSDIQQF 126

  Fly   130 LNVSLRGFVATSEYTYSNYVLTMIQENIGCCGATG-PWDYLDLRQPLPSSCRDTVSGNAFFNGCV 193
            ...:::.:..:.:..... .||.|..::.|||.|| ..|.:.:..|     :.....|....||.
Zfish   127 YTQTVKNYKESPDGPLKE-TLTAIHFSLQCCGPTGLVTDGVSVTCP-----KQEGLANVITTGCS 185

  Fly   194 DELTWFFEGKTGWIVALAMTLGLLNVICAVMSFVLVQAVKKEEE 237
            ..:...|..:...|..:.:.:|::.|...:.|.:|..|:::..:
Zfish   186 SVIQDMFNSRLHVIGGVGIGIGVIMVFGMIFSMLLCCAIRRTRD 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp2ANP_525037.1 Tetraspanin 19..230 CDD:459767 57/218 (26%)
cd9bXP_068075677.1 Tetraspanin 14..222 CDD:459767 57/218 (26%)
CD9_LEL 113..196 CDD:239405 18/88 (20%)

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