Protein Alignment Tsp2A and rom1a

DIOPT Version :10

• Sequence 1: NP_525037.1
• Gene: Tsp2A / 31080
• FlyBaseID: FBgn0024361
• Length: 244
• Species: Drosophila melanogaster
• Sequence 2: NP_957088.1
• Gene: rom1a / 393767
• ZFINID: ZDB-GENE-040426-1765
• Length: 346
• Species: Danio rerio
• Alignment Length: 294
• Identity: 58/294 - (19%)
• Similarity: 97/294 - (32%)
• Gaps: 121/294 - (41%)

  Fly    55 RILEAQSFYIGVYVLIGISIVMMAVSF-LGCL--------SALMENT-------------LA--- 94
            |:..||    |:::|..::.|..|::| |||.        ..:|:||             ||
Zfish    13 RVKLAQ----GLWMLSWLATVGGAITFTLGCFLKTELRRRGEVMDNTDIHCVPNTLMIVGLASMG 73

  Fly    95 ------------------------LFVFVGTQVFGFIAIVAGSAVLLQFSTINSSLQPLLNVSLR 135
                                    :..|.|..:| |..::..|.:|...  :..||:..|.:.|:
Zfish    74 GNYFASRICQDALDAGRFPRWKTYMKPFFGCSIF-FTTLMLISIILSYI--MKGSLETSLKIGLK 135

  Fly   136 GFVATSEYT------YSNYVLTMIQENIGCCGATGPWD----------YLD-------------- 170
            ..:...:.|      :....:..:|....|||.|...|          |||
Zfish   136 NGIRFYKDTDIPGRCFQKQTIDRLQMEFHCCGNTDYRDWFEVQWISNRYLDFSSKEVKDRIRSNV 200

  Fly   171 ----LRQPLPSSC------------------------RDTVSGNAFFNGCVDELTWFFEGKTGWI 207
                |...:|.||                        .:|...|.|.:||.:.|..:|.|....|
Zfish   201 DGRYLVDGVPFSCCNPSSPRPCIQYKITNDSAHYNYEHETEELNLFIHGCREALVNYFMGLMNTI 265

  Fly   208 VALAMTLGLLNVICAVMSFV-----LVQAVKKEE 236
            .|:.:::.|:.  |:|:|.|     .::||..:|
Zfish   266 GAVVLSVFLIQ--CSVLSSVRLLQTSMEAVAGQE 297

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp2A	NP_525037.1	Tetraspanin	19..230	CDD:459767	55/286 (19%)
rom1a	NP_957088.1	Tetraspanin	16..>167	CDD:459767	28/157 (18%)
		peripherin_like_LEL	120..262	CDD:239415	26/143 (18%)