DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp2A and Tspan7

DIOPT Version :10

Sequence 1:NP_525037.1 Gene:Tsp2A / 31080 FlyBaseID:FBgn0024361 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_001385666.1 Gene:Tspan7 / 363447 RGDID:1589725 Length:249 Species:Rattus norvegicus


Alignment Length:266 Identity:62/266 - (23%)
Similarity:96/266 - (36%) Gaps:90/266 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 IGCVKYTLFCFNIVAWMISTALFALTVWLRAEPGFNDWLRILEAQSFYIGVYVLIGISIVMMAVS 80
            |.|:|..|..::.|.|:....|.|:.||                ....:|.|:            
  Rat    12 ITCLKTLLIIYSFVFWITGAILLAVGVW----------------GKLTLGTYI------------ 48

  Fly    81 FLGCLSALMEN-TLALFVFVGT-------QVFGFIAIVAGSAVLLQFSTINSSLQPL--LNVSLR 135
                 |.:.|| |.|.:|.:||       .:||..|...||..:|:...:..||..|  |...:.
  Rat    49 -----SLIAENSTNAPYVLIGTGTTIVVFGLFGCFATCRGSPWMLKLYAMFLSLVFLAELVAGIS 108

  Fly   136 GFVATSEY------TYS----NY--------VLTMIQENIGCCG-------ATGPWDYLDLRQPL 175
            |||...|.      ||:    ||        .:..:|.::.|||       ::.|: :|:...| 
  Rat   109 GFVFRHEIKDTFLRTYTDAMQNYNGKDERSRAVDHVQRSLSCCGVQNYTNWSSSPY-FLEHGIP- 171

  Fly   176 PSSCRDTVSGNAF-------------FNGCVDELTWFFEGKTGWI------VALAMTLGLLNVIC 221
            ||.|.:....|..             ..||.|.:|.|.|...|.|      :|.:..:|:| :.|
  Rat   172 PSCCMNETDCNPLDLHNLTVAATKVNQKGCYDLVTSFMETNMGIIAGVAFGIAFSQLIGML-LAC 235

  Fly   222 AVMSFV 227
            .:..|:
  Rat   236 CLSRFI 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp2ANP_525037.1 Tetraspanin 19..230 CDD:459767 60/263 (23%)
Tspan7NP_001385666.1 Tetraspanin 15..239 CDD:459767 59/259 (23%)
TM4SF2_6_like_LEL 110..213 CDD:239414 24/104 (23%)

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