DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp2A and Tsp42Er

DIOPT Version :10

Sequence 1:NP_525037.1 Gene:Tsp2A / 31080 FlyBaseID:FBgn0024361 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_523644.1 Gene:Tsp42Er / 35629 FlyBaseID:FBgn0033139 Length:211 Species:Drosophila melanogaster


Alignment Length:227 Identity:49/227 - (21%)
Similarity:89/227 - (39%) Gaps:37/227 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 VKYTLFCFNIVAWMISTALFALTVWLRAEPGFNDWLRILEAQSFYIGVYVLIGISIVMMAVSFLG 83
            ::|..|.||.:..::..|...:.| :..:       :|.......:|:|:.:| |||.: :||.|
  Fly     8 IRYLAFLFNFLCAVLGIATIVVNV-IAID-------QIAPKDQLILGLYIAVG-SIVFL-LSFFG 62

  Fly    84 CLSALMENTLALFVFVGTQ-VFGFIAIVAGSAVLLQFSTIN-SSLQPLLNVSLRGFVATSEYTYS 146
            |..|:.|:....:.:..:. |...::||......:.|...: :.|:.........|.|.:||   
  Fly    63 CFGAIKESICVTWAYATSMLVMLIVSIVMLFVFRMHFEEDSITKLKQAFAKQTNTFDAMAEY--- 124

  Fly   147 NYVLTMIQENIGCCGATGPWDYLDLRQPLPSSCRDTVSGNAFFNGCVDELTWFFEGK------TG 205
                   |....|||.....||.|....:||||.|. :...:.:||:.::...:|..      .|
  Fly   125 -------QTQYQCCGIYKLKDYGDAYITVPSSCYDQ-NDTPYRDGCLAKMETQYEELLKGPKIVG 181

  Fly   206 WIVALAMTLGLLNVICAVMSFVLVQAVKKEEE 237
            |:        |:.:.....:|..:..|....|
  Fly   182 WM--------LMVIEIGAFTFSTIMGVSLRNE 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp2ANP_525037.1 Tetraspanin 19..230 CDD:459767 47/218 (22%)
Tsp42ErNP_523644.1 Tetraspanin 8..195 CDD:459767 46/215 (21%)

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