DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp2A and Tsp42Eh

DIOPT Version :9

Sequence 1:NP_001188523.1 Gene:Tsp2A / 31080 FlyBaseID:FBgn0024361 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster


Alignment Length:228 Identity:52/228 - (22%)
Similarity:86/228 - (37%) Gaps:47/228 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 LTVWLRAEPGFNDWL--------RIL---EAQSFYIGVYVLIGISIVMMAVSFLGCLSALMENTL 93
            |.:|      :..||        |:|   ..:.....:.||:|..||:  .|..|.::...::.:
  Fly    25 LLIW------YGAWLLDSLSEEQRMLGMDHGEDLAAVLCVLLGTVIVV--ASIFGSVAVAKDSRV 81

  Fly    94 ALFVFVGTQVFGFIAIVAGSAVLLQFS----------TINSSLQPLLNVSLRGFVATSEYTYSNY 148
            .|..:....||..|..:    ||:..|          ::...|..|.::...|          |.
  Fly    82 LLICYAVLLVFLLIVQI----VLVSISYAASRDFLPDSLRQGLDDLWDLQHEG----------NS 132

  Fly   149 VLTMIQENIGCCGATGPWDYLDL-RQPLPSSC--RD-TVSGNAFFNGCVDELTWFFEGKTGWIVA 209
            .|...:|.:.|||.....|||.| :.|.||.|  || |...|.|..||..:...:...||....:
  Fly   133 TLNTYEEWLHCCGRNSAEDYLHLEKMPPPSCCLNRDCTKHLNLFMTGCEVKFKEYVGAKTANFHS 197

  Fly   210 LAMTLGLLNVICAVMSFVLVQAVKKEEEQASNY 242
            |:..|.:.....:|.:..||.:::...::...|
  Fly   198 LSWFLVIFEFAGSVTTCYLVDSIRNHRDRIRFY 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp2ANP_001188523.1 Tetraspannin 18..232 CDD:278750 51/216 (24%)
tetraspanin_LEL 116..204 CDD:239401 26/101 (26%)
Tsp42EhNP_523634.1 Tetraspannin 8..220 CDD:278750 51/216 (24%)
tetraspanin_LEL 109..192 CDD:239401 24/92 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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