DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp2A and cd82a

DIOPT Version :9

Sequence 1:NP_001188523.1 Gene:Tsp2A / 31080 FlyBaseID:FBgn0024361 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_997826.2 Gene:cd82a / 324098 ZFINID:ZDB-GENE-030131-2818 Length:256 Species:Danio rerio


Alignment Length:256 Identity:61/256 - (23%)
Similarity:108/256 - (42%) Gaps:46/256 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 GCV---KYTLFCFNIVAWMISTALFALTVWLRAEPGFNDWLRILEAQSFYIGV--YVLIGISIVM 76
            ||:   ||.||.||.:.::....:....:|:..:.  ...:.:|:..|..:.|  |:|||:....
Zfish     4 GCITATKYFLFLFNFIFFIFGATIMGFGLWILLDN--QSLIAVLQESSVILKVVSYILIGVGSFS 66

  Fly    77 MAVSFLGCLSALMENTLALFVFVGTQVFGFIAIVAGSAVLLQFSTINSSLQPLLNVSLRGFVATS 141
            |.:.|||||.|:.|....|.::....:...:|.||.| :|:.|.      :.||.......|:..
Zfish    67 MLLGFLGCLGAIYEIRCLLGLYFTCLLLILLAQVAVS-ILIYFQ------RDLLKTEADKIVSQV 124

  Fly   142 EYTYSNYVLT------MIQENIGCCGATG--PWDYLDLRQ----PL-PSSCRD------TVSGNA 187
            ...|.....|      .:|..:.|||..|  .||...:.:    || |.||.:      .|..|.
Zfish   125 VANYPGQNKTAEQAWDYLQRTMQCCGWNGRMDWDENHIIKNNTVPLYPCSCHNYSIQAPIVPDNG 189

  Fly   188 FF-----------NGCVDEL-TWFFEGKTGWIVALAMTLGLLNVICAVMSFVLVQAVKKEE 236
            |.           .||::.: :|.|. ..|.|:.:.:.:.::.::..::|..|.::|.:|:
Zfish   190 FCQASSSDWPIYQTGCLEHVGSWLFT-NYGIILGICLGVAVIELLGMILSMGLCKSVHQED 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp2ANP_001188523.1 Tetraspannin 18..232 CDD:278750 58/249 (23%)
tetraspanin_LEL 116..204 CDD:239401 26/118 (22%)
cd82aNP_997826.2 CD37_CD82_like_LEL 106..218 CDD:239413 25/118 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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