DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp2A and Tspan11

DIOPT Version :10

Sequence 1:NP_525037.1 Gene:Tsp2A / 31080 FlyBaseID:FBgn0024361 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_001019433.1 Gene:Tspan11 / 312727 RGDID:1305424 Length:253 Species:Rattus norvegicus


Alignment Length:251 Identity:62/251 - (24%)
Similarity:101/251 - (40%) Gaps:53/251 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 EQLEKQIGCVKYTLFCFNIVAWMISTALFALTVWLRAEPGFNDWLRILEAQSFYIGVYVLIGISI 74
            ||.:..:..:||.||.||...|:...|:.|:.:|...|...  :|.||.:.:|....||||.:..
  Rat     7 EQDDWLLAHLKYLLFIFNFFFWVGGAAVMAVGIWTLVEKSV--YLSILASSTFAASAYVLIFVGG 69

  Fly    75 VMMAVSFLG----------CLSALMENTLALFVFVGTQVFGFIAIVAGSAVLLQFSTINSSLQPL 129
            ::|...|||          |||......||:|:         :.:|||....:.:..::..|:..
  Rat    70 LVMTTGFLGFGAIIREQKSCLSTYFCLLLAIFL---------VELVAGVLAHVYYQRLSDELKRH 125

  Fly   130 LNVSLR---GFVATSEYTYSNYVLTMIQENIGCCGATGPWDYLD---------LRQPLPSSCRDT 182
            |:.:|.   |....:|.|.|   :..:|::..|||:....|:..         :.:.:|.||..|
  Rat   126 LHSTLTEHYGQPGAAEITAS---VDRLQQDFKCCGSNSSADWQHSVYILSQEAIGRQVPDSCCKT 187

  Fly   183 V---------SGNAF--FNGCVDELTWFFE------GKTGWIVALAMTLGLLNVIC 221
            |         ..|.:  ..||:.:|..|..      |..|..||.....|::...|
  Rat   188 VVARCGQRAHPSNIYKVEGGCMAKLEQFLADHLLLMGAVGIGVACLQICGMVLTCC 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp2ANP_525037.1 Tetraspanin 19..230 CDD:459767 60/242 (25%)
Tspan11NP_001019433.1 Tetraspanin 16..244 CDD:459767 60/242 (25%)
CD151_like_LEL 112..220 CDD:239408 22/110 (20%)

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