DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp2A and Tspan12

DIOPT Version :10

Sequence 1:NP_525037.1 Gene:Tsp2A / 31080 FlyBaseID:FBgn0024361 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_766595.1 Gene:Tspan12 / 269831 MGIID:1889818 Length:305 Species:Mus musculus


Alignment Length:257 Identity:52/257 - (20%)
Similarity:105/257 - (40%) Gaps:49/257 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 EKQIGCVKYTLFCFNIVAWMISTALFALTVWLRAEPGFNDWL----------RILEA--QSFYIG 65
            |..:.|::..|:..|::.|::|.::.|::.|:|      |:|          |:.||  .:::..
Mouse     4 EDSVKCLRCLLYALNLLFWLMSISVLAVSAWMR------DYLNNVLTLTAETRVEEAVILTYFPV 62

  Fly    66 VY-VLIGISIVMMAVSFLGCLSALMENTLALFVFVGTQVFGFIAIVAGSA--------VLLQFST 121
            |: |:|.:...::.|..||....:..|.|.|..:.||.:..|...:|...        |.:|:|.
Mouse    63 VHPVMIAVCCFLIIVGMLGYCGTVKRNLLLLAWYFGTLLVIFCVELACGVWTYEQEVMVPVQWSD 127

  Fly   122 INSSLQPLLNVSLRGFVATSEYTYSNYVLTMIQENIGCCGATGPWDYLDLRQ---PLPSSCRDTV 183
            :.:....:.|..|      ..|.:..:.....|....|||.....|:|::.:   |..|.|....
Mouse   128 MVTLKARMTNYGL------PRYRWLTHAWNYFQREFKCCGVVYFTDWLEMTEMDWPPDSCCVREF 186

  Fly   184 SG-----------NAFFNGCVDELTWFFEGKTGWIVA--LAMTLGLLNVICAVMSFVLVQAV 232
            .|           :.:..||..::..|..|.....|.  |.:::|:..::..:::..|:.|:
Mouse   187 PGCSKQAHQEDLSDLYQEGCGKKMYSFLRGTKQLQVLRFLGISIGVTQILAMILTITLLWAL 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp2ANP_525037.1 Tetraspanin 19..230 CDD:459767 49/247 (20%)
Tspan12NP_766595.1 Tetraspanin 10..246 CDD:459767 49/247 (20%)
TM4SF12_like_LEL 116..218 CDD:239410 20/107 (19%)

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