DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp2A and TSPAN17

DIOPT Version :10

Sequence 1:NP_525037.1 Gene:Tsp2A / 31080 FlyBaseID:FBgn0024361 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_001353420.1 Gene:TSPAN17 / 26262 HGNCID:13594 Length:355 Species:Homo sapiens


Alignment Length:246 Identity:64/246 - (26%)
Similarity:98/246 - (39%) Gaps:44/246 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 EKQIGCV-KYTLFCFNIVAWMISTALFALTVWLRAEPGFNDWLRILEAQSFYIGVYVLIGISIVM 76
            |.::||. ||.||.||||.|::.....|:.:|...|.|....:..|........|::.:.:..||
Human    10 EPEVGCCGKYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNISALTDLGGLDPVWLFVVVGGVM 74

  Fly    77 MAVSFLGCLSALMENTLAL---FVFVGTQVFGFIAIVAGSAVLLQFSTINSSLQPLLNVSLRGFV 138
            ..:.|.||:.||.|||..|   .||:|. :| |:.:..|....:....|...|...:|.:::.: 
Human    75 SVLGFAGCIGALRENTFLLKFFSVFLGL-IF-FLELATGILAFVFKDWIRDQLNLFINNNVKAY- 136

  Fly   139 ATSEYTYSNYVLTMIQENIGCCGATGPWDY--------LDL-----RQPLPSSC--RDTV----- 183
             ..:....| ::...||...||||.||.|:        .||     |..:|.||  ||..     
Human   137 -RDDIDLQN-LIDFAQEYWSCCGARGPNDWNLNIYFNCTDLNPSRERCGVPFSCCVRDPAEDVLN 199

  Fly   184 ---------------SGNAFFNGCVDELTWFFEGKTGWIVALAMTLGLLNV 219
                           .|.....|||.:...:.:.....:..:.|.:.||.|
Human   200 TQCGYDVRLKLELEQQGFIHTKGCVGQFEKWLQDNLIVVAGVFMGIALLQV 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp2ANP_525037.1 Tetraspanin 19..230 CDD:459767 61/240 (25%)
TSPAN17NP_001353420.1 Tetraspanin 18..>157 CDD:459767 39/143 (27%)
TM4SF9_like_LEL 115..235 CDD:239412 25/122 (20%)

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