DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp2A and Cd9

DIOPT Version :10

Sequence 1:NP_525037.1 Gene:Tsp2A / 31080 FlyBaseID:FBgn0024361 Length:244 Species:Drosophila melanogaster
Sequence 2:XP_063141640.1 Gene:Cd9 / 24936 RGDID:2318 Length:249 Species:Rattus norvegicus


Alignment Length:239 Identity:62/239 - (25%)
Similarity:91/239 - (38%) Gaps:80/239 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 CVKYTLFCFNIVAWMISTALFALTVWLRAEPGFNDWLRILEAQ----SFYIGVYVLIGISIVMMA 78
            |:||.||.||.:.|:...|:.|:.:|||.:   :....|.|.:    |||.|||:|||...:||.
  Rat     9 CIKYLLFGFNFIFWLAGIAVLAIGLWLRFD---SQTKSIFEQETNHSSFYTGVYILIGAGALMML 70

  Fly    79 VSFLGCLSALMENTLALFVFVGTQVFGFIAIVAGSAVLLQFSTINSSLQPLLNVSLRGFVATSEY 143
            |.||||..|:.|:...|.:|     |||:.::....:.                     .|...|
  Rat    71 VGFLGCCGAVQESQCMLGLF-----FGFLLVIFAIEIA---------------------AAVWGY 109

  Fly   144 TYSNYVLTMIQE-------------------------NIGCCGATGP-----WDYLDLRQPLPS- 177
            |:.:.|:..:||                         .:.|||..|.     .|....:|.|.| 
  Rat   110 THKDEVIKELQEFYKDTYQKLRNKDEPQRETLKAIHMALNCCGIAGGVEQFISDICPKKQVLESF 174

  Fly   178 ---SCRDTVSGNAFFNGCVDEL---TWFFEGKTGWIVALAMTLG 215
               ||.|          .:||:   .:...|..|..:|:.|..|
  Rat   175 QVKSCPD----------AIDEVFHSKFHIIGAVGIGIAVVMVSG 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp2ANP_525037.1 Tetraspanin 19..230 CDD:459767 61/238 (26%)
Cd9XP_063141640.1 None

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