DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp2A and Tspan18

DIOPT Version :10

Sequence 1:NP_525037.1 Gene:Tsp2A / 31080 FlyBaseID:FBgn0024361 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_899003.1 Gene:Tspan18 / 241556 MGIID:1917186 Length:248 Species:Mus musculus


Alignment Length:255 Identity:64/255 - (25%)
Similarity:104/255 - (40%) Gaps:61/255 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 IGCVKYTLFCFNIVAWMISTALFALTVWLRAEP-GFNDWLRILEAQSFY-IGVYVLIGISIVMMA 78
            :.|:||.:|.||...::....|..:.:|:..:| ||.:   |:...... .|.|:::.:..::..
Mouse     6 LSCMKYLMFVFNFFVFLGGACLLGVGIWVLVDPTGFRE---IVATNPLLTTGAYIVLAMGGLLFL 67

  Fly    79 VSFLGCLSALMEN-TLALFVFVGTQVFGFIAIVAGSAVLLQFSTINSSLQPLLNVSLRGFVATSE 142
            :.||||..|:.|| .|.||.|:...:   |.:|..||.:|.|.......:......|     |..
Mouse    68 LGFLGCCGAVRENRCLLLFFFLFILI---IFLVELSAAILAFIFREHLTREFFTKEL-----TKH 124

  Fly   143 Y-----------TYSNYVLTMIQENIGCCGATGPWDY----------LDLRQPLPSSC------- 179
            |           |:::.::|     .||||..||.|:          ||..: :|.:|       
Mouse   125 YQGDNDTDVFSATWNSVMIT-----FGCCGVNGPEDFKLASVFRLLTLDTEE-VPKACCRREPQT 183

  Fly   180 RDTV---------SGNAFFN--GCVDELTWFFEGKTGWIVALAMTLGLLNVICAVMSFVL 228
            ||.|         ..|.|.|  ||...:...||  |...:|.|..:|:|.:...:|.|.:
Mouse   184 RDGVVLSREECQLGRNPFINKQGCYTVILNTFE--TYVYLAGAFAIGVLAIELFLMVFAM 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp2ANP_525037.1 Tetraspanin 19..230 CDD:459767 63/252 (25%)
Tspan18NP_899003.1 Tetraspanin 10..245 CDD:459767 63/251 (25%)
uroplakin_I_like_LEL 105..218 CDD:239409 27/125 (22%)

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