DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp2A and Rom1

DIOPT Version :10

Sequence 1:NP_525037.1 Gene:Tsp2A / 31080 FlyBaseID:FBgn0024361 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_033099.3 Gene:Rom1 / 19881 MGIID:97998 Length:351 Species:Mus musculus


Alignment Length:275 Identity:53/275 - (19%)
Similarity:86/275 - (31%) Gaps:110/275 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 VWLRAEPGFNDWLRILEAQSFYIGVYVLIGISIVMMAVSFLGCL------------SALMENTLA 94
            :||.:      ||..|      :|...|:....:::.:..||..            :||...|:|
Mouse    21 IWLLS------WLLAL------VGGLTLLCSGHLLVQLGHLGTFLAPSCSFPALPQTALAAGTVA 73

  Fly    95 L----------------------------FVFVGTQV-FGFIAIVAGSAVLLQFSTINSSLQPLL 130
            |                            .:.|||.. .|.:.:..|.|:.|..| :|..|:..|
Mouse    74 LGTGLGGAGASRASLDAAQYPPWRGVLTPLLAVGTAAGGGLLTLALGLALALPVS-LNQGLEEGL 137

  Fly   131 NVSLRGFVATS--EYTYSNYVLTMIQENIGCCGATGPWD----------YLD------------- 170
            ..:|..:..|.  ....:..::..:|....|||..|..|          |||             
Mouse   138 EAALAHYKDTEVPGRCQAKRLMDELQLRYHCCGRHGYKDWFGVQWVSNRYLDPSDQDVVDRIQSN 202

  Fly   171 -----LRQPLPSSCRDTVSG------------------------NAFFNGCVDELTWFFEGKTGW 206
                 |...:|.||.:..|.                        |.:..||.:.|....:|.:|.
Mouse   203 VEGLYLIDGVPFSCCNPHSPRPCLQSQLSDPYAHPLFDPRQPNLNLWAQGCHEVLLEHLQGLSGT 267

  Fly   207 IVA-LAMTLGLLNVI 220
            :.: ||:|| ||.::
Mouse   268 LGSILAVTL-LLQIL 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp2ANP_525037.1 Tetraspanin 19..230 CDD:459767 53/275 (19%)
Rom1NP_033099.3 peripherin_like_LEL 128..264 CDD:239415 24/136 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 329..351
Blue background indicates that the domain is not in the aligned region.

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