DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp2A and Cd82

DIOPT Version :9

Sequence 1:NP_001188523.1 Gene:Tsp2A / 31080 FlyBaseID:FBgn0024361 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_001129527.1 Gene:Cd82 / 12521 MGIID:104651 Length:266 Species:Mus musculus


Alignment Length:265 Identity:55/265 - (20%)
Similarity:111/265 - (41%) Gaps:54/265 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 GCV---KYTLFCFNIVAWMISTALFALTVWLRAEPGFNDWLRILE--AQSFYIGVYVLIGISIVM 76
            |||   ||.||.||::.:::...:....||:.|:.  |.::.:|:  :.|..:|.||.||:..:.
Mouse     4 GCVKVTKYFLFLFNLLFFILGAVILGFGVWILADK--NSFISVLQTSSSSLQVGAYVFIGVGAIT 66

  Fly    77 MAVSFLGCLSALMENTLALFVFVGTQVFGFIAIVAGSAVLLQFSTINSSLQPLLNVSLRGFVA-- 139
            :.:.||||:.|:.|....|.::.   ||..:.::|...|.:.|......|:..:..::...:.  
Mouse    67 IVMGFLGCIGAVNEVRCLLGLYF---VFLLLILIAQVTVGVLFYFNADKLKKEMGNTVMDIIRNY 128

  Fly   140 TSEYTYS-----NYVLTMIQENIGCCGATGPWDYLD-------LRQPLPSSC------------- 179
            |:..|.|     :||    |..:.|||....:::.:       .:...|.||             
Mouse   129 TANATSSREEAWDYV----QAQVKCCGWVSHYNWTENEELMGFTKTTYPCSCEKIKEEDNQLIVK 189

  Fly   180 -------RDTVSGN------AFFNGCVDELTWFFEGKTGWIVALAMTLGLLNVICAVMSFVLVQA 231
                   ..|||.|      ....||:::...:.:...|.::.:...:.::.::...:|..|.:.
Mouse   190 KGFCEADNSTVSENNPEDWPVNTEGCMEKAQAWLQENFGILLGVCAGVAVIELLGLFLSICLCRY 254

  Fly   232 VKKEE 236
            :..|:
Mouse   255 IHSED 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp2ANP_001188523.1 Tetraspannin 18..232 CDD:278750 53/258 (21%)
tetraspanin_LEL 116..204 CDD:239401 20/127 (16%)
Cd82NP_001129527.1 CD37_CD82_like_LEL 106..228 CDD:239413 20/125 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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