DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp2A and si:ch73-139j3.4

DIOPT Version :9

Sequence 1:NP_001188523.1 Gene:Tsp2A / 31080 FlyBaseID:FBgn0024361 Length:244 Species:Drosophila melanogaster
Sequence 2:XP_005164654.1 Gene:si:ch73-139j3.4 / 101884436 ZFINID:ZDB-GENE-140106-202 Length:355 Species:Danio rerio


Alignment Length:254 Identity:56/254 - (22%)
Similarity:105/254 - (41%) Gaps:43/254 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SDEQLEKQIGCVKYTLFCFNIVAWMISTALFALTVWLRAEPGFNDWLRILEA-QSFYIGVYVLIG 71
            :|::|:    .:|:.....|....::..::||.:.|:..:.  :.::.:|.: |...:....|..
Zfish     3 TDDKLQ----ILKFFFMLVNAFFVILGISIFACSAWILFDK--DSFVSVLSSGQEVKVVAGGLFF 61

  Fly    72 ISIVMMAVSFLGCLSALMENTLALFVFVGTQVFGFIAIVAGS-----AVLLQFSTINSSLQPLLN 131
            |.:|::.||.|||..|..|:...:..::..    .|.|:.|.     .:|::..||...|:..::
Zfish    62 IGLVVVGVSLLGCAGAYFESRCFIIFYLSF----LIVIILGQIFITFVLLIRRKTIEQFLRDKVD 122

  Fly   132 VSLRGFVATSEYTYSNYVLTMIQENIGCCGA--TGPWDYLDLRQPL------PSSC--------- 179
            ..::.: ...|...|..:|..:|.:..|||.  :..|....:...|      |.||         
Zfish   123 EIIKQY-GGDEIQTSWKLLDSVQTSARCCGRLNSNEWRNNTVIASLGGTDIYPCSCFNGTCPVIL 186

  Fly   180 RDTVS-GN---AFFNGCVDELTWFFEGKTGWIVALAMTLGLLNVICAVMSFVL-VQAVK 233
            .:|.| ||   .|..||.:.|..:.|  ...||...|.:.|  ::..:|.|:. ||..|
Zfish   187 EETYSFGNGSDVFERGCEETLVNWLE--MNIIVIFGMDVAL--ILIQIMQFIFAVQTFK 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp2ANP_001188523.1 Tetraspannin 18..232 CDD:278750 53/241 (22%)
tetraspanin_LEL 116..204 CDD:239401 25/108 (23%)
si:ch73-139j3.4XP_005164654.1 Tetraspannin 10..237 CDD:306775 51/237 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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