DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp2A and tspan2b

DIOPT Version :10

Sequence 1:NP_525037.1 Gene:Tsp2A / 31080 FlyBaseID:FBgn0024361 Length:244 Species:Drosophila melanogaster
Sequence 2:XP_005161955.1 Gene:tspan2b / 101883842 ZFINID:ZDB-GENE-100922-60 Length:212 Species:Danio rerio


Alignment Length:238 Identity:64/238 - (26%)
Similarity:103/238 - (43%) Gaps:41/238 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 QLEKQIGCVKYTLFCFNIVAWMISTALFALTVWLRAEPGFNDWLRILEAQSFYIGVYVLIGISIV 75
            ::|..:.|||:.||.||.:.|::.:.:.|:.:|||.:|.....|......:|:||||:||....:
Zfish     3 KVEGGMKCVKFLLFIFNFIFWLMGSLVLAVGLWLRLDPNTVSLLGEDGPDTFFIGVYILIAAGGL 67

  Fly    76 MMAVSFLGCLSALMENTLALFVFVGTQVFGFIAIVAGSAVLL-QFSTINSS--LQPLLNVSLRGF 137
            :|.|.|.||..|:.|:...|.:|     |..:.::.|:.|.. .|..||..  :|     .:|.|
Zfish    68 VMLVGFFGCCGAVRESQCLLGLF-----FACLLVIFGAEVAAGVFGFINKDKIIQ-----EIRHF 122

  Fly   138 VATSEYTYSNYVLTMIQENI-GCCGATGPWDYLDLRQPLPSSCRDTVSGNA-------FFNGCVD 194
            ...|....:|.........: .|||::         ...||||::.|....       |||..: 
Zfish   123 YDESAGNNNNNATVQSYHTVLSCCGSS---------TVTPSSCKNMVFNQTCDVAIEEFFNSKL- 177

  Fly   195 ELTWFFEGKTGWIVALAMTLGLLNVICAVMSFVLVQAVKKEEE 237
                |..|..|..:|..|.:|:      :.|.||..|::...|
Zfish   178 ----FIVGYVGIGIAGVMIIGM------IFSMVLCCAIRNSRE 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp2ANP_525037.1 Tetraspanin 19..230 CDD:459767 60/221 (27%)
tspan2bXP_005161955.1 Tetraspanin 23..203 CDD:459767 54/209 (26%)

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