DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp2A and tspan2b

DIOPT Version :9

Sequence 1:NP_001188523.1 Gene:Tsp2A / 31080 FlyBaseID:FBgn0024361 Length:244 Species:Drosophila melanogaster
Sequence 2:XP_005161955.1 Gene:tspan2b / 101883842 ZFINID:ZDB-GENE-100922-60 Length:212 Species:Danio rerio


Alignment Length:238 Identity:64/238 - (26%)
Similarity:103/238 - (43%) Gaps:41/238 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 QLEKQIGCVKYTLFCFNIVAWMISTALFALTVWLRAEPGFNDWLRILEAQSFYIGVYVLIGISIV 75
            ::|..:.|||:.||.||.:.|::.:.:.|:.:|||.:|.....|......:|:||||:||....:
Zfish     3 KVEGGMKCVKFLLFIFNFIFWLMGSLVLAVGLWLRLDPNTVSLLGEDGPDTFFIGVYILIAAGGL 67

  Fly    76 MMAVSFLGCLSALMENTLALFVFVGTQVFGFIAIVAGSAVLL-QFSTINSS--LQPLLNVSLRGF 137
            :|.|.|.||..|:.|:...|.:|     |..:.::.|:.|.. .|..||..  :|     .:|.|
Zfish    68 VMLVGFFGCCGAVRESQCLLGLF-----FACLLVIFGAEVAAGVFGFINKDKIIQ-----EIRHF 122

  Fly   138 VATSEYTYSNYVLTMIQENI-GCCGATGPWDYLDLRQPLPSSCRDTVSGNA-------FFNGCVD 194
            ...|....:|.........: .|||::         ...||||::.|....       |||..: 
Zfish   123 YDESAGNNNNNATVQSYHTVLSCCGSS---------TVTPSSCKNMVFNQTCDVAIEEFFNSKL- 177

  Fly   195 ELTWFFEGKTGWIVALAMTLGLLNVICAVMSFVLVQAVKKEEE 237
                |..|..|..:|..|.:|:      :.|.||..|::...|
Zfish   178 ----FIVGYVGIGIAGVMIIGM------IFSMVLCCAIRNSRE 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp2ANP_001188523.1 Tetraspannin 18..232 CDD:278750 61/224 (27%)
tetraspanin_LEL 116..204 CDD:239401 21/98 (21%)
tspan2bXP_005161955.1 Tetraspannin 10..205 CDD:278750 61/224 (27%)
tetraspanin_LEL 109..177 CDD:243179 18/81 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1205716at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X522
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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