DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp2A and TSPAN1

DIOPT Version :10

Sequence 1:NP_525037.1 Gene:Tsp2A / 31080 FlyBaseID:FBgn0024361 Length:244 Species:Drosophila melanogaster
Sequence 2:XP_011538762.1 Gene:TSPAN1 / 10103 HGNCID:20657 Length:258 Species:Homo sapiens


Alignment Length:224 Identity:57/224 - (25%)
Similarity:94/224 - (41%) Gaps:41/224 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 VKYTLFCFNIVAWMISTALFALTVWLRAEPGFNDWLRIL-----EAQSFYIGVYVLIGISIVMMA 78
            :|..:..||::.::...||.|:.:|:..:..  .:|:|.     .|..|....|.||...:|:.|
Human     7 IKTMMILFNLLIFLCGAALLAVGIWVSIDGA--SFLKIFGPLSSSAMQFVNVGYFLIAAGVVVFA 69

  Fly    79 VSFLGCLSALMENTLALFVFVGTQVFGFIAIVAGSAVLLQFSTINSSLQPLLNVSL--RGFVATS 141
            :.||||..|..|:..||..|....:..|||.||.:.|.|.::|:......||.|..  :.:.:..
Human    70 LGFLGCYGAKTESKCALVTFFFILLLIFIAEVAAAVVALVYTTMAEHFLTLLVVPAIKKDYGSQE 134

  Fly   142 EYTYSNYVLTMIQENIGCCGATGPWDYLDLRQPL--------PSSCRDTVSGNA----------- 187
            ::|   .|.....:.:.|||.|...|:.|  .|.        |..|.|.|:..|           
Human   135 DFT---QVWNTTMKGLKCCGFTNYTDFED--SPYFKENSAFPPFCCNDNVTNTANETCTKQKAHD 194

  Fly   188 -FFNGCVDELTWFFEGKTGWIVALAMTLG 215
             ...||.::|  .::.:|.     |:|:|
Human   195 QKVEGCFNQL--LYDIRTN-----AVTVG 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp2ANP_525037.1 Tetraspanin 19..230 CDD:459767 57/224 (25%)
TSPAN1XP_011538762.1 Tetraspanin 7..>151 CDD:459767 39/148 (26%)
uroplakin_I_like_LEL 110..212 CDD:239409 22/113 (19%)

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