DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DAAM and grid2ipa

DIOPT Version :9

Sequence 1:NP_001188522.1 Gene:DAAM / 31075 FlyBaseID:FBgn0025641 Length:1463 Species:Drosophila melanogaster
Sequence 2:XP_009297619.1 Gene:grid2ipa / 561017 ZFINID:ZDB-GENE-091113-42 Length:1804 Species:Danio rerio


Alignment Length:1106 Identity:242/1106 - (21%)
Similarity:421/1106 - (38%) Gaps:309/1106 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   324 FKDDEPPEICVVEGA-----FTLQTLTPTQPMPSVDELDTKFAELVEELDLTAPNKEAMLSLPAQ 383
            |.|..||.....|.|     |......|..|.|..:....:     :.:....|.::.::|  .|
Zfish   922 FNDPPPPAGFTPEHAPRQLTFRRHPGPPPPPPPRANPPPKR-----QSIHKVLPTRDELMS--QQ 979

  Fly   384 KKWQIYCSRKLPLDAADGPDAAAVTQPPTAEHYIERLKELVVHISLSPEDSPSHELG-NRLDGHA 447
            :..|.:.|  ||:.             |||.|..:..:::  |.||.|  .||.|:. ..:.|||
Zfish   980 QLLQEHHS--LPVQ-------------PTAGHPQQSQQQM--HQSLPP--MPSPEINQTSISGHA 1025

  Fly   448 AFVDALKTALRTSTHSFVLRFVELDGLPALLDLLLQLDIRVANSPLHTSLIGCIKALMNNSMGRA 512
            .:      .:::..|                             |.|                  
Zfish  1026 IY------EMQSQVH-----------------------------PAH------------------ 1037

  Fly   513 HVLAHPTAIDTIARSLAADNIRTKIAALEILGAVCLVPGGHRKVLQAMLHFQVFATERTRFQSIV 577
            .|..||        .:..|:                           .:| |....:|.:.||| 
Zfish  1038 QVHQHP--------QMQQDH---------------------------QMH-QFHQHKRHQSQSI- 1065

  Fly   578 NDLDRSTYAYRDNVNLKTALMSFVN-----------AVLNYGPGQENLEFRLHLRYEFLMLGIQP 631
                :..:::|.:..::|.|.|.::           .:....|...:.:.::|..||        
Zfish  1066 ----KVHHSHRSHQPIQTQLSSSMDRLDRIDRNPDRLIYEMQPQPLHSDQQVHHAYE-------- 1118

  Fly   632 VIDKLRTHENETLDR--------HLDFFE-MVRAEDEKEFARRFKEEHVDTKSAGSM-------- 679
            :....:.|...::||        ||:..| |.|.|..:...|:....|:....:.::        
Zfish  1119 MHQSHQAHLTSSMDRLDRLEQIQHLERLERMERIERLERADRQMHRAHMAQALSQAVQPPQQSQQ 1183

  Fly   680 ------FELLRRKLSHSPAYPHMLSLLQHMLLLPYTGHCTEHWLLIDRVVQQIVLQVEQRPNSDL 738
                  :::.:....:.|..|.           |.|.|..:    |:.:.|  |..::..|....
Zfish  1184 QYNQQQYQMHQSNQDYPPTQPP-----------PPTRHIHQ----IEHIHQ--VQPIQSAPQYHQ 1231

  Fly   739 IVDPDDPEKQLKLAAESPVHDPDVAPLQIDVAKLVRLL--VKEEQLTQARKRADELERENFDVQS 801
            |..|..|.:..::.:   ...|..:.||.....|.:.|  .:::||.|.::|..:.:.:..:.|.
Zfish  1232 IHQPHQPHQTQQILS---TFQPHPSQLQQQQQLLQQQLQQQQQQQLQQQQQRQQQQQLQQLEQQQ 1293

  Fly   802 RLAKKEQELDLRMQEKEDLETGLARMRERLEKESAQHSQAVQRAQTAEMRAEDLQHRLISEQQER 866
            :|.:.||:..|:.|:              ::::.||..|.:|:.|         |||        
Zfish  1294 QLQQLEQQQQLQQQQ--------------IQQQQAQQQQQIQQQQ---------QHR-------- 1327

  Fly   867 ARLERLVTEGSIPDDQKVAGLTGCNGAVSPPP---------------------APPMLKAIPPPP 910
                      |.|....||     ....||.|                     .||    |.|.|
Zfish  1328 ----------STPQIPSVA-----QARQSPQPMYHEHRHHHHHRSHHEAQSQMQPP----ISPQP 1373

  Fly   911 ----PPMAPSMMPPPPPPCPGAPP--PPPSMAQTMAPAPPKVDLPKKNVPQPTN----PLKSFNW 965
                |....|:.||||||.|  ||  |||              |||.: ||.::    .:|...|
Zfish  1374 QTHNPTEGSSVEPPPPPPLP--PPCVPPP--------------LPKGS-PQKSDSSHMSVKRLRW 1421

  Fly   966 SKLPDAKLQGTVWSELDESKLYNNME--LESID-KLFSAYQKNGVSATDGS--YEDLRVTGKAAK 1025
            .::.::  :||:|.:::|...|:.:.  ::.:| :|....||..|:..:.|  .|..:      |
Zfish  1422 EQVENS--EGTIWGQMEEDSDYDKLSDMVKYLDLELHFGTQKTPVALPEPSPQVETFK------K 1478

  Fly  1026 QKVLSVIDGRRAQNCTILLSKLKMSDMEISKAILSMDSNEQLQLDMVEQLLKFTPSAEERALLDE 1090
            :.|:.::..::|.|.:||::.||:|..|:.:.:::| |:|:|:...::|||.:.|..:|....::
Zfish  1479 KDVVEILSHKKAYNASILIAHLKLSPGELRQVLMTM-SSERLEPPHIKQLLLYAPDDDEVRQYEQ 1542

  Fly  1091 HSEDIESLARADRFLYEISKIPHYEQRLKSLHYKKRFMLTINDLVPRITSVMEASREVARSRRLR 1155
            :..|...|:..|:|:.::..:|.|:.||||||:|........::......|.:||.|:..|::|.
Zfish  1543 YRNDPGKLSEPDQFVLQMLSVPEYKTRLKSLHFKTTLQEKTEEMRGAYDCVFKASLELKNSKKLA 1607

  Fly  1156 KLLELVLALGNYMNRG--ARGNASGFRLASLNRLADTKSSAAKGTTLLHYLVQVIERKFKDLLKL 1218
            |:||.|||:|||:|.|  ..|..:||::..|..|:.||:...| :|.||.||:.:.:.|.::|..
Zfish  1608 KILEFVLAMGNYLNNGQPKTGKTTGFKINFLTELSTTKTVDGK-STFLHILVKSLCQHFPEVLDF 1671

  Fly  1219 EDDIPHVREASKVSLGEMDKDIQMLRTGLADVAREIEFHRSSGPAQQGDRFLPVMREFHAQASVR 1283
            ..::..|.:|:||:...:..|...|...:.|:....:    ..||...|||..||..|...:...
Zfish  1672 GKELVMVPQAAKVNQRNITSDFNDLHATIQDIRVACQ----KMPATAEDRFAVVMSGFLENSHPA 1732

  Fly  1284 FAELEDKFQDMKTRFDRAVRLFGEDGSVLQPDEFFGIFDSFLAAFAEARHDNESFRRRQEEEEKR 1348
            ...||...|.....|.:....|||||.....:.|||||..|:|.|.....|.::....:.....|
Zfish  1733 VQSLESLQQRAMEEFCKVASYFGEDGKTTTTENFFGIFAEFIAKFERTLSDIQTENPPRSPRSPR 1797

  Fly  1349 A 1349
            |
Zfish  1798 A 1798

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DAAMNP_001188522.1 Drf_GBD 349..548 CDD:283920 30/199 (15%)
Drf_FH3 551..737 CDD:283917 34/219 (16%)
FliJ 779..>875 CDD:280262 18/95 (19%)
FH2 950..1328 CDD:280362 112/388 (29%)
grid2ipaXP_009297619.1 PDZ_signaling 56..121 CDD:238492
PDZ_signaling 135..203 CDD:238492
HN_L-delphilin-R1_like 230..309 CDD:259820
PDZ_signaling 384..459 CDD:238492
HN_L-delphilin-R2_like 498..577 CDD:259821
BAF1_ABF1 <1014..1171 CDD:282530 36/258 (14%)
FH2 1406..1778 CDD:280362 111/385 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45725
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.