DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DAAM and fmnl1

DIOPT Version :9

Sequence 1:NP_001188522.1 Gene:DAAM / 31075 FlyBaseID:FBgn0025641 Length:1463 Species:Drosophila melanogaster
Sequence 2:NP_001007523.1 Gene:fmnl1 / 493573 XenbaseID:XB-GENE-1003193 Length:1167 Species:Xenopus tropicalis


Alignment Length:1258 Identity:310/1258 - (24%)
Similarity:497/1258 - (39%) Gaps:340/1258 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   345 TPTQ-PMPSVDELDTKFAELVEELDLTAPNKEAMLSLPAQKKWQIYCSRKLPLDAADGPDAAAVT 408
            ||:: |.|:..||:.:|..::..::|.....:.:......|||::.|.:          :...|.
 Frog    33 TPSKLPRPNSVELEQRFNVVLNAMNLPPDKIQVLRQYDQDKKWELVCDQ----------ERFQVK 87

  Fly   409 QPPTAEHYIERLKELVVHISLSPEDSPSHELGNRLDGHAAFVDALKTALRTSTHSFVLRFV--EL 471
            .||.|  ||::|:      |.......|.:...|:......:..|:.:|||:...:|..|:  |:
 Frog    88 NPPAA--YIQKLR------SYLDTGGISRKFKRRVQESTQVLRELEISLRTNHIGWVEEFLSPEV 144

  Fly   472 DGLPALLDLL------------------------LQLDIRVAN------SPLHTS---------- 496
            .||.||::.|                        ||..:...|      ||.:|.          
 Frog   145 GGLDALVEYLSYAQGSCPIDTECSDNGTPEKSKSLQRSLEDINKSSSSPSPTNTPSRSRNLTARY 209

  Fly   497 ----------------------LIGCIKALMNNSMGRAHVLAHPTAIDTIARSLAADNIRTKIAA 539
                                  .|.|::|:||...|.:.|::|.:.::.|..||:..|.|||...
 Frog   210 NLHSRSTMRNTKHANMKDDVHVCIMCLRAIMNYQSGFSMVMSHSSCVNKITLSLSNKNPRTKALV 274

  Fly   540 LEILGAVCLVPGGHRKVLQAMLHFQVFATERTRFQSIVNDLDRSTYAYR---DNVNLKTALMSFV 601
            ||:|.|||||.|||..:|.|..:|.....|..||:.::.       .:|   .|::...|.|.|:
 Frog   275 LELLAAVCLVRGGHELILSAFNYFMEMCGEGARFEKLME-------YFRTEDSNIDFMVACMQFI 332

  Fly   602 NAVLNYGPGQENLEFRLHLRYEFLMLGIQPVIDKLRTHENETLDRHLDFFEMVRAEDEKEFARRF 666
            |.|::   ..:|:.||:.|:|||.:||:...::.|:..|:|.|.      ..::|..:..|....
 Frog   333 NIVVH---SVKNMNFRVFLQYEFTLLGLDEYLEILKNTESERLQ------VQIQAYLDNIFDVNS 388

  Fly   667 KEEHVDTKSAGSMFELLRRKLSHSPAYPHMLSLLQHMLLLPYTGHCTEHWLLIDRVVQQIVLQVE 731
            ..|..|||:     |:|.          |:..|.:|                :.||.:::     
 Frog   389 LLEDTDTKN-----EMLE----------HVEDLQEH----------------LTRVTEKL----- 417

  Fly   732 QRPNSDLIVDPDDPEKQLKLAAESPVHDPDVAPLQIDVAKLVRLLVKEEQLTQARKRADELEREN 796
            |...::.:....:.||||           |....::..|| .:|:|:..|:||           |
 Frog   418 QLTENEYVRRVAELEKQL-----------DQCRREMSSAK-EKLVVQAPQVTQ-----------N 459

  Fly   797 FDVQSRLAKK-----EQELDLRMQEKEDLETGLARMRERLEKESAQHSQAVQRAQTAEMRAEDLQ 856
            ...::.|.|:     |...|...:|..|               :...|.....|.|..:....::
 Frog   460 IVQRTELVKRSVLWVEPAGDTCTEEISD---------------NTFTSDLPSAASTPPLSPSAIR 509

  Fly   857 HRLISEQ-------QERARLERLVT---------EGS---------------------------- 877
            ..|||..       ..|....|..|         |.|                            
 Frog   510 ITLISPSVTSTDALSSRGNSPRSTTPPALLPSLPESSEIFSIPAPSPVPSSEDSSDTALKASKVN 574

  Fly   878 -IPDDQKVAGLTGCNGAVS----------PPPAPPM--LKAIPPPPP-PMAPSMMP--------- 919
             :|....:...|..:.|.|          |||.||:  :..|||||| ||:..:.|         
 Frog   575 PVPSPPSIIDQTQTSNAQSLSRTHDESPPPPPPPPLPSIAEIPPPPPLPMSADVPPPPPLPELSG 639

  Fly   920 -PPPPPCP----GAPPPPPSMAQTMAPAPPKVDLPKKNVPQPTNP-------------------- 959
             |||||.|    |||||||||.....|.||... |....|.|..|                    
 Frog   640 IPPPPPLPMGEQGAPPPPPSMGAPGVPPPPPPP-PSGFGPAPPPPPGGQPAATLNTGVSIKKPIQ 703

  Fly   960 ----LKSFNWSKLPDAKLQGTVWSELDESKLYNNMELESIDKLFSAYQKNGVSATDGSYEDLRVT 1020
                ::..||..|...::.|||::.|::.|:...:::...::.|.. :..|.|.|..|   ::|.
 Frog   704 TKLRMQVLNWVALKPTQINGTVFTHLNDEKVLQELDMSDFEENFKT-KAQGPSQTTFS---MKVK 764

  Fly  1021 GKAAKQKVLSVIDGRRAQNCTILLSKLKMSDMEISKAILSMDSNEQLQLDMVEQLLKFTPSAEER 1085
            ....:...:|:|:..||:|..|.|.|..:|...|:.||...|. :...:|.:|.|.:|.|:..||
 Frog   765 AAQNQPNKVSLIETNRAKNLAITLRKGGLSPEAITSAIQKYDM-QAFNMDFLELLARFLPTDWER 828

  Fly  1086 ALLDEHSED---IESLARADRFLYEISKIPHYEQRLKSLHYKKRFMLTINDLVPRITSVMEASRE 1147
            ..:..:..|   ::.|...|||:..:..||...:|:.::.:...|....:.|.|::.:::.||..
 Frog   829 QQISRYCRDQKPLDDLTAEDRFMVHLCSIPRLAERVNTMTFMANFPDMASRLKPQLDALIAASMS 893

  Fly  1148 VARSRRLRKLLELVLALGNYMNRGARGNASGFRLASLNRLADTKSSAAKGTTLLHYLVQVIERKF 1212
            :..|.:|:.:||||||.|||||...||.|.||||.||:.|.:|||:..| .|||||:::||..|:
 Frog   894 IKSSDKLKGILELVLAFGNYMNSSKRGAAYGFRLQSLDVLLETKSTDRK-QTLLHYMIRVICEKY 957

  Fly  1213 KDLLKLEDDIPHVREASKVSLGEMDKDIQMLRTGLADVAREIEFHRSSGPAQQGDRFLPVMREFH 1277
            ..|.....|:..:.:|:.|||..:..|::.|:.|:..|.:|.        .:|.|..  ::::|.
 Frog   958 SHLSNFYCDLNFMDKAATVSLDSVLADVKSLQAGMEQVQKEF--------TKQDDCL--ILKDFI 1012

  Fly  1278 AQASVRFAELEDKFQDMKTRFDRAVRLFGEDGSVLQPDEFFGIFDSFLAAFAEARHDNESFRRRQ 1342
            ........:|....:..:..:|.||..|||:.....|..||.||..|:.|:.:|..|.|:: ::|
 Frog  1013 KSNMDSLKQLSADAKTAQEAYDAAVGYFGENAKTTPPSTFFPIFVRFIKAYKQAEQDLETW-KKQ 1076

  Fly  1343 EEEEKRAKQE----------------------AELKK-------RTIER-----------KNKTG 1367
            |...:.||.|                      |||.|       |..|:           :|:..
 Frog  1077 ESAVQEAKPETAGKQAPQSPVVKSLRPQVNLMAELNKKLQTKEPRVYEQNWAIEDIITDLRNQPY 1141

  Fly  1368 LMTSVARNLGLK--SGSSNGDPD 1388
            ..|.|.|..|.|  ||.....||
 Frog  1142 RRTDVGRRSGKKQNSGQPLNTPD 1164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DAAMNP_001188522.1 Drf_GBD 349..548 CDD:283920 58/262 (22%)
Drf_FH3 551..737 CDD:283917 43/188 (23%)
FliJ 779..>875 CDD:280262 19/116 (16%)
FH2 950..1328 CDD:280362 112/404 (28%)
fmnl1NP_001007523.1 Drf_GBD 37..283 CDD:399398 58/263 (22%)
Drf_FH3 286..>423 CDD:368862 43/188 (23%)
fibronec_FbpA 390..>601 CDD:411474 46/284 (16%)
FH2 698..1064 CDD:396655 110/381 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54599
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000085
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3069
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.950

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