DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DAAM and Grid2ip

DIOPT Version :9

Sequence 1:NP_001188522.1 Gene:DAAM / 31075 FlyBaseID:FBgn0025641 Length:1463 Species:Drosophila melanogaster
Sequence 2:NP_001152793.1 Gene:Grid2ip / 170935 MGIID:2176213 Length:1203 Species:Mus musculus


Alignment Length:517 Identity:143/517 - (27%)
Similarity:224/517 - (43%) Gaps:96/517 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   860 ISEQQERARLERLVTEGSIPDDQKVAGLTGCNGAVSPPPAPPMLKAIPPPPP------------- 911
            :|..:|.:.|    |..||.|.            :.|||..|     |||||             
Mouse   723 VSSSEEGSSL----TYSSISDH------------IPPPPLSP-----PPPPPLPFHDPKPSSRTS 766

  Fly   912 ------------PMAPSMMPPPPPPCPGAPPPPPSMAQTMAPAPPKVDLPKKNVPQPTN--PLKS 962
                        |:.....|.||||.|..|||.|.       |||.:.....:....|:  .:|.
Mouse   767 DGPRGPPQSLTKPLTQINHPVPPPPPPPLPPPVPC-------APPMLSRGVGHRRSETSHMSVKR 824

  Fly   963 FNWSKLPDAKLQGTVWSELDESKLYNNMELESIDKLFSAYQKNGVSATDGSYEDLRV---TGKA- 1023
            ..|.::.::  :||:|.:|.|...|        |||....:          |.||.:   |.|. 
Mouse   825 LRWEQVENS--EGTIWGQLGEDSDY--------DKLSDMVK----------YLDLELHFGTQKPP 869

  Fly  1024 ---------AKQKVLSVIDGRRAQNCTILLSKLKMSDMEISKAILSMDSNEQLQLDMVEQLLKFT 1079
                     .|::|:.::..::|.|.:|||:.||::..|:.:.::||:. .:|:...:.|||.|.
Mouse   870 KPVPGPEPFRKKEVVEILSHKKAYNTSILLAHLKLTPGELRQVLMSMEP-RRLEPAHLAQLLLFA 933

  Fly  1080 PSAEERALLDEHSEDIESLARADRFLYEISKIPHYEQRLKSLHYKKRFMLTINDLVPRITSVMEA 1144
            |.|:|........|....|:..|:|:.::..:|.|:.||:|||::........::...:..:.:|
Mouse   934 PDADEEQRYQAFREAPGRLSEPDQFVLQMLSVPEYKTRLRSLHFQATLQEKTEEIRGSLECLRQA 998

  Fly  1145 SREVARSRRLRKLLELVLALGNYMNRG--ARGNASGFRLASLNRLADTKSSAAKGTTLLHYLVQV 1207
            |.|:..||:|.|:||.|||:|||:|.|  .....:||::..|..|..||:...| :|.||.|.:.
Mouse   999 SLELKNSRKLAKILEFVLAMGNYLNDGQPKTNKTTGFKINFLTELNSTKTVDGK-STFLHILAKS 1062

  Fly  1208 IERKFKDLLKLEDDIPHVREASKVSLGEMDKDIQMLRTGLADVAREIEFHRSSGPAQQGDRFLPV 1272
            :.:.|.:||....|:|.|..|:||:...:..|:    ..|.|...||:....|......|||..|
Mouse  1063 LSQHFPELLGFAQDLPTVPLAAKVNQRALTGDL----ADLHDTVSEIQVACQSMAPSSEDRFAVV 1123

  Fly  1273 MREFHAQASVRFAELEDKFQDMKTRFDRAVRLFGEDGSVLQPDEFFGIFDSFLAAFAEARHD 1334
            |..|...|......|:...::......:|:..||||......:.|||||..|::.|..|..|
Mouse  1124 MASFLETAQPALRALDGLQREAMEELGKALAFFGEDSKATTSEAFFGIFSEFMSKFERALSD 1185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DAAMNP_001188522.1 Drf_GBD 349..548 CDD:283920
Drf_FH3 551..737 CDD:283917
FliJ 779..>875 CDD:280262 3/14 (21%)
FH2 950..1328 CDD:280362 110/394 (28%)
Grid2ipNP_001152793.1 PDZ_signaling 9..69 CDD:238492
HN_L-delphilin-R1_like 122..201 CDD:259820
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 215..270
PDZ_signaling 269..342 CDD:238492
HN_L-delphilin-R2_like 378..457 CDD:259821
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 466..541
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 563..586
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 611..656
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 710..821 31/125 (25%)
FH2 812..1180 CDD:280362 110/393 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1922
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45725
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3069
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.940

Return to query results.
Submit another query.