DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DAAM and fmnl3

DIOPT Version :10

Sequence 1:NP_001188522.1 Gene:DAAM / 31075 FlyBaseID:FBgn0025641 Length:1463 Species:Drosophila melanogaster
Sequence 2:XP_004911895.1 Gene:fmnl3 / 100493601 XenbaseID:XB-GENE-6086974 Length:1023 Species:Xenopus tropicalis


Alignment Length:1174 Identity:298/1174 - (25%)
Similarity:487/1174 - (41%) Gaps:338/1174 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   349 PMPSVDELDTKFAELVEELDLTAPNKEAML-SLPAQKKWQIYCSRKLPLDAADGPDAAAVTQPPT 412
            |||...||:.:||.::..::| .|:|..:| ....:|||.:.|.:          :...|..|| 
 Frog    21 PMPEPGELEERFAMVLSSMNL-PPDKARLLRQYDNEKKWDLICDQ----------ERFQVKNPP- 73

  Fly   413 AEHYIERLKELVVHISLSPEDSPSHELGNRLDGHAAFVDALKTALRTSTHSFVLRFVELD--GLP 475
             ..||::|:..     |.| .....:...|:......:..|:.:|||:...:|..|:..|  ||.
 Frog    74 -HTYIQKLQSF-----LDP-GVTRKKFRRRVQESTKVLRELEISLRTNHIGWVREFLNNDNKGLD 131

  Fly   476 ALLDLLLQL------------------------------DIRVANS---PLHTSL---------- 497
            .|::.|...                              |::..||   |....|          
 Frog   132 VLVEYLSFAQCAVMFDFEGLENGEDGLVEKSKPWSRSIEDLQHPNSLPTPFANGLARSARQSVLR 196

  Fly   498 --------------------------IGCIKALMNNSMGRAHVLAHPTAIDTIARSLAADNIRTK 536
                                      |.|::|:||...|...|::||.|::.||.||...|.|||
 Frog   197 SYNTLPGKKALKNSRLVSQKDDVHVCIMCLRAIMNYQYGFNLVMSHPHAVNEIALSLNNKNPRTK 261

  Fly   537 IAALEILGAVCLVPGGHRKVLQAMLHFQVFATERTRFQSIVNDLDRSTYAYRD---NVNLKTALM 598
            ...||:|.|||||.|||..:|.|..:|:....|..||:.::.       .:|:   |::...|.|
 Frog   262 ALVLELLAAVCLVRGGHEIILSAFDNFKEVCKETHRFEKLME-------YFRNEDSNIDFMVACM 319

  Fly   599 SFVNAVLNYGPGQENLEFRLHLRYEFLMLGIQPVIDKLRTHENETL----DRHLDFFEMVRAEDE 659
            .|:|.|::   ..|::.||:||::||..||::..::|.:..|:|.|    ..:||          
 Frog   320 QFINIVVH---SVEDMNFRVHLQFEFTKLGLEDFLEKAKHTESEKLLVQIQAYLD---------- 371

  Fly   660 KEFARRFKEEHVDTKSAGSMFELLRRKLSHSPAYPHMLSLLQHMLLLPYTGHCTEHWLLIDRVVQ 724
                              ::|::                                ..||.|...:
 Frog   372 ------------------NVFDV--------------------------------GGLLEDAETK 386

  Fly   725 QIVLQ-VEQRPNSDLIVDPDDPEKQLKLAAESPVHDPDVAPLQIDVAKLVRLLVKEEQLTQARKR 788
            .:.|: ||:                                             .||||:...::
 Frog   387 NVALEKVEE---------------------------------------------LEEQLSHMTEK 406

  Fly   789 ADELERENF----DVQSRLAKKEQELDLRMQEKEDLETGLARMRERL-EKESA-QHSQAVQRAQT 847
            ..:||.||.    :::..|..:|:||.:..:..|:....:..:|..: |||.| ||.:.:::|.|
 Frog   407 LLDLENENIMRVAELEKTLLHREKELTVLKETYENANHQVHTLRRIIKEKEEAFQHLRQLEQANT 471

  Fly   848 AEMRAEDLQHRLISEQQERARLERLVTEGSIPDDQKVAGLTGCNGAVSPPPAPPMLKAIPPPPPP 912
            ::.....|.                ::..||.|....|.|.       ||||...:.|.||||||
 Frog   472 SQPAGSTLP----------------LSATSIGDISLSAELL-------PPPASASVPAPPPPPPP 513

  Fly   913 MAPSMMPPPPPPCPGAPPPPPSMAQTMAPAPPKVDLPKKNVPQPT-------------NPLKS-- 962
                  ||||||.|  |||||.|.....|.||   ||..:   |:             .|:|:  
 Frog   514 ------PPPPPPPP--PPPPPPMPSKCPPPPP---LPSSS---PSVILTTGLSAIRIKKPIKTKF 564

  Fly   963 ----FNWSKLPDAKLQGTVWSELDESKLYNNMELESIDKLFSAYQKNGVSATDGSYEDL----RV 1019
                |||:.|...::.|||:::||:.::..:::::..::||.       :...|...||    ..
 Frog   565 RLPVFNWTALKPNQISGTVFNDLDDERILQDLDMDKFEELFK-------TKAQGPAIDLTCPKNK 622

  Fly  1020 TGKAAKQKVLSVIDGRRAQNCTILLSKLKMSDMEISKAILSMDSNEQLQLDMVEQLLKFTPSAEE 1084
            |.:.:..|| ::::..||:|..|.|.|...|..||.|||.:.|. ..|.:|.||.|::|.|:..|
 Frog   623 TSQRSASKV-TLLEANRAKNLAITLRKAGRSSEEICKAIQTFDL-RTLPVDFVECLVRFLPTEAE 685

  Fly  1085 RALLDEHSED---IESLARADRFLYEISKIPHYEQRLKSLHYKKRFMLTINDLVPRITSVMEASR 1146
            ..||.::..:   :|.|:..|||:...||:....||:..:.:...|...:..|.|::.:|:.||.
 Frog   686 VKLLRQYERERKPLEDLSDEDRFMMLFSKVERLSQRMSIMTFLGNFNENLQLLTPQLNAVIAASV 750

  Fly  1147 EVARSRRLRKLLELVLALGNYMNRGARGNASGFRLASLNRLADTKSSAAKGTTLLHYLVQVIERK 1211
            .|..|.:|:::||::||||||||...||:..||:|.||:.|.||||:..| .|||:|:..:.:.|
 Frog   751 SVKSSPKLKQMLEVILALGNYMNSSKRGSVYGFKLQSLDLLQDTKSTDRK-LTLLNYIALIAKEK 814

  Fly  1212 FKDLLKLEDDIPHVREASKVSLGEMDKDIQMLRTGLADVAREIEFHRSSGPAQQGDRFLPVMREF 1276
            :.::....:::..|.:|:.|||..:..|::.|..|:..:.:|...|.::           .:|.|
 Frog   815 YSEVATFYNELHFVEKAAAVSLENVLLDVKELGKGMDLIRKESHHHDNT-----------FLRNF 868

  Fly  1277 HAQASVRFAELEDKFQDMKTRFDRAVRLFGEDGSVLQPDEFFGIFDSFLAAFAEARHDNESFRRR 1341
            .:....:..:|:...:..:..:...|..|||:.....|..||.:|..|:.::.||..:|| .|::
 Frog   869 VSSNEGKLDKLQKDARTAEEAYAAVVLYFGENPKTTPPSVFFPVFARFIKSYKEAELENE-MRKK 932

  Fly  1342 QEE--EEKRAKQEAELKKRTIERKNKTGLMTSVARNLGLKSGSSNGDPDSPAKGGDNKGEFDDLI 1404
            |||  .||...|||  ||.                           ||.||.:  .||.:..|||
 Frog   933 QEEVLREKMLAQEA--KKL---------------------------DPKSPVQ--KNKRQQQDLI 966

  Fly  1405 SALR 1408
            :.||
 Frog   967 AELR 970

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DAAMNP_001188522.1 Drf_GBD 349..548 CDD:461886 63/270 (23%)
Drf_FH3 551..737 CDD:461885 38/193 (20%)
Smc <765..>875 CDD:440809 23/115 (20%)
FH2 950..1328 CDD:396655 111/403 (28%)
fmnl3XP_004911895.1 Drf_GBD 21..273 CDD:461886 63/270 (23%)
Drf_FH3 276..458 CDD:461885 54/296 (18%)
FH2 556..921 CDD:396655 110/385 (29%)

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