DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DAAM and daam1

DIOPT Version :9

Sequence 1:NP_001188522.1 Gene:DAAM / 31075 FlyBaseID:FBgn0025641 Length:1463 Species:Drosophila melanogaster
Sequence 2:XP_004917271.2 Gene:daam1 / 100125016 XenbaseID:XB-GENE-983772 Length:1074 Species:Xenopus tropicalis


Alignment Length:1169 Identity:545/1169 - (46%)
Similarity:769/1169 - (65%) Gaps:140/1169 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   319 VWCGCFKDDEPPEICV---VEGAFTLQTLTPTQPMPSVDELDTKFAELVEELDLTAPNKEAMLSL 380
            ::| ||:..|.|||..   .:..|.||::.|..|:|.|:|||..|.|||:||||:..::|||.:|
 Frog    14 IFC-CFRSSEHPEITYRLRNDSNFALQSMEPALPVPPVEELDAMFVELVDELDLSEKHREAMFAL 77

  Fly   381 PAQKKWQIYCSRKLPLDAADGPDAAAVTQPPTAEHYIERLKELVVHISLSPEDSPSHELGNRLDG 445
            .|:||||||||:|  .|..:|    |.:.|   |.||::|..|....:|...|....:..|:.  
 Frog    78 SAEKKWQIYCSKK--KDHEEG----ATSWP---EFYIDQLNSLAARRTLFAMDKEDEDERNKT-- 131

  Fly   446 HAAFVDALKTALRTSTHSFVLRFVELDGLPALLDLLLQLDIRVANSPLHTSLIGCIKALMNNSMG 510
                :::|||||||....||.||::||||..:|:.|..:|..:|.|.:|||||||||||||||.|
 Frog   132 ----IESLKTALRTKPMRFVTRFIDLDGLTCILNFLKCMDYEIAESQIHTSLIGCIKALMNNSQG 192

  Fly   511 RAHVLAHPTAIDTIARSLAADNIRTKIAALEILGAVCLVPGGHRKVLQAMLHFQVFATERTRFQS 575
            |||||||..:|:.||:|||.:||:||:|.|||:||||||||||:|||:||||:|.:|:||||||:
 Frog   193 RAHVLAHSESINVIAQSLATENIKTKVAVLEIMGAVCLVPGGHKKVLEAMLHYQRYASERTRFQT 257

  Fly   576 IVNDLDRSTYAYRDNVNLKTALMSFVNAVLNYGPGQENLEFRLHLRYEFLMLGIQPVIDKLRTHE 640
            ::|||||||..|||.|:||||:|||:||||:.|.|.|:|:|||||||||||||||||:||||.||
 Frog   258 LINDLDRSTGRYRDEVSLKTAIMSFINAVLSQGAGVESLDFRLHLRYEFLMLGIQPVMDKLREHE 322

  Fly   641 NETLDRHLDFFEMVRAEDEKEFARRFKEEHVDTKSAGSMFELLRRKLSHSPAYPHMLSLLQHMLL 705
            |.|||||||||||:|.|||.|||:||...|:|||||..||||:|::|:|:.:|||..|::.|.|.
 Frog   323 NSTLDRHLDFFEMLRNEDELEFAKRFDLVHIDTKSATQMFELIRKRLTHTESYPHFTSIMHHCLQ 387

  Fly   706 LPY--TGHCTEHWLLIDRVVQQIVLQVEQRPNSDLIVDPDDPEKQLKLAAESPVHDPDVAPLQ-I 767
            :||  :|:...||||:||:|||||:|.|:.                        .|||::||: .
 Frog   388 MPYKRSGNTVHHWLLLDRIVQQIVIQNEKG------------------------QDPDISPLENF 428

  Fly   768 DVAKLVRLLVKEEQLTQARKRADELERENFDVQSRLAKKEQELDLRMQEKEDLETGLARMRERLE 832
            :|..:||:||.|.::.|.:::|:::.:|:.::|.:|.|||:|.|.:.||||::...|.:|:|:||
 Frog   429 NVKNVVRMLVNENEVKQWKEQAEKMRKEHNELQQKLEKKERECDAKTQEKEEMMQTLNKMKEKLE 493

  Fly   833 KESAQHSQAVQRAQTAEMRA--EDLQHRLISEQQERARLERLVTEGSIPDDQKVAGLTGCNGAVS 895
            ||:.::....|  |.||:.|  ::|..|.:|.|              ||         ||     
 Frog   494 KETTEYKNVKQ--QVAELTAQIQELNSRAVSAQ--------------IP---------GC----- 528

  Fly   896 PPPAP-----PMLKAIPPPPPPMAPSMM-----PPPPPPCPGAPPPPPS--MAQTMAP-APPKVD 947
            |||.|     ||.....|||||..|.|:     ||||||.||.|||||.  :..|..| ||....
 Frog   529 PPPPPGAPGGPMSGNFMPPPPPPPPPMLCGIAPPPPPPPPPGGPPPPPGPPLLGTAPPGAPMGPA 593

  Fly   948 LPKKNVPQPTNPLKSFNWSKLPDAKLQGTVWSELDESKLYNNMELESIDKLFSAYQK-------N 1005
            :.:||:|||.||||||||.||.|.||:||:|.:||::|::..::||.|::.|||||:       |
 Frog   594 MKRKNIPQPKNPLKSFNWVKLADNKLEGTLWIDLDDAKVFKILDLEDIERTFSAYQRQQDFFMNN 658

  Fly  1006 GVSATDGSYEDLRVTGKAAKQKVLSVIDGRRAQNCTILLSKLKMSDMEISKAILSMDSNEQLQLD 1070
            |:...:....|..::.| .|.|.||||||||||||.||||:||:::.||.:|||:||..|.|..|
 Frog   659 GIKQKETDCTDDTLSSK-MKVKELSVIDGRRAQNCNILLSRLKLTNEEIKRAILTMDEQEDLPKD 722

  Fly  1071 MVEQLLKFTPSAEERALLDEHSEDIESLARADRFLYEISKIPHYEQRLKSLHYKKRFMLTINDLV 1135
            |:||||||.|...:..||:||..:::.:|:|||||:|:|:|.||:|||:||::||:|...:.::.
 Frog   723 MLEQLLKFVPEKSDIDLLEEHKHELDRMAKADRFLFEMSRINHYQQRLQSLYFKKKFAERVAEVK 787

  Fly  1136 PRITSVMEASREVARSRRLRKLLELVLALGNYMNRGARGNASGFRLASLNRLADTKSSAAKGTTL 1200
            |::.::.:||:||.:|:.|::|||:|||.|||||:|.||||.||:::|||::||||||..|..||
 Frog   788 PKVEAIRDASKEVLQSKCLKQLLEVVLAFGNYMNKGQRGNAYGFKVSSLNKIADTKSSIDKNITL 852

  Fly  1201 LHYLVQVIERKFKDLLKLEDDIPHVREASKVSLGEMDKDIQMLRTGLADVAREIEFHRSSGPAQQ 1265
            ||||:.|:|:|:..::.|.:::..:..|:||::.|::|:|..||.||..|..|:|:.::. |...
 Frog   853 LHYLITVVEKKYPKIVNLHEELQAISVAAKVNMTELEKEIGTLRNGLKSVENELEYQKTQ-PTLP 916

  Fly  1266 GDRFLPVMREFHAQASVRFAELEDKFQDMKTRFDRAVRLFGEDGSVLQPDEFFGIFDSFLAAFAE 1330
            ||:|:.|:.:|...|...|.::||...:.|..|.::.:.|||:.:.:||||||||||.||.||.|
 Frog   917 GDKFVSVVSQFITVAGFSFCDVEDLLSEAKELFMKSAKHFGEETNKMQPDEFFGIFDQFLQAFLE 981

  Fly  1331 ARHDNESFRRRQEEEEKRAKQEAELKKRTIERKNKTGLMTSVARNLGLKSGSSNGDPDSPAKGGD 1395
            |:.:||:.|:|:||||:|.:.||:||::. ||:.|       ||              ...:.|:
 Frog   982 AKQENENIRKRKEEEERRIRMEAQLKEQR-ERERK-------AR--------------KAKENGE 1024

  Fly  1396 NKGEFDDLISALRTGDVFGEDMAKFKRSRKARVLNGGGSSTGHTSPPRHGSLQREESGRERERT 1459
            .:||||||:||||:|:||.:|::|.||:|| |:.:                 |..||.|||..|
 Frog  1025 EEGEFDDLVSALRSGEVFDKDLSKLKRNRK-RIAS-----------------QNTESSRERPVT 1070

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DAAMNP_001188522.1 Drf_GBD 349..548 CDD:283920 100/198 (51%)
Drf_FH3 551..737 CDD:283917 123/187 (66%)
FliJ 779..>875 CDD:280262 31/97 (32%)
FH2 950..1328 CDD:280362 182/384 (47%)
daam1XP_004917271.2 Drf_GBD 45..230 CDD:399398 100/199 (50%)
Drf_FH3 233..437 CDD:368862 131/227 (58%)
COG4372 442..>524 CDD:226809 29/83 (35%)
FH2 596..979 CDD:396655 182/384 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 369 1.000 Domainoid score I903
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H36635
Inparanoid 1 1.050 989 1.000 Inparanoid score I308
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1204639at2759
OrthoFinder 1 1.000 - - FOG0000085
OrthoInspector 1 1.000 - - oto104031
Panther 1 1.100 - - O PTHR45725
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3069
SonicParanoid 1 1.000 - - X1795
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.190

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