DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32812 and rcvrna

DIOPT Version :9

Sequence 1:NP_001284770.1 Gene:CG32812 / 31074 FlyBaseID:FBgn0025642 Length:225 Species:Drosophila melanogaster
Sequence 2:NP_001025419.1 Gene:rcvrna / 570333 ZFINID:ZDB-GENE-050913-106 Length:203 Species:Danio rerio


Alignment Length:228 Identity:49/228 - (21%)
Similarity:85/228 - (37%) Gaps:61/228 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGSVGSRQLNPVQLCDHQQATGLSAEQLEQLHTRFRSLDRHQRGYLTPTDLLRIPQLSLNPLHRQ 65
            ||:..|..|:...|.|.:..|..:.|:|...:|.|  |.....|.:|....            ..
Zfish     1 MGNTKSGALSKELLEDLKLNTKYTEEELCAWYTSF--LKECPSGRITKEQF------------EG 51

  Fly    66 IIDGFFPSRDPSA---------------RIGFKQFVDTCSTILVPQFGRGSVRRRDGRVQKLQLL 115
            |...|||..||:|               .:.||:::     :.:.....|...|      ||:..
Zfish    52 IYASFFPDADPTAYARHVFRSFDTNADGTLDFKEYI-----VALHLTSSGKTLR------KLEWA 105

  Fly   116 SKMFDTRRSGCITRSDFRQIMRSIVNLAWSQQQDQER---QEGLSENRLPEVEAELQLLEHQAFG 177
            ..::|...:|.|::::.::|:|||.|:.  ..:||:.   .|...|.|..::.|.....::    
Zfish   106 FALYDVDGNGTISKNEVQEIVRSIFNMV--PVEDQKNLPDDENTPEKRADKIWAFFGKQDN---- 164

  Fly   178 FCCDHISYGEFEK---------RLFSVDVDRRL 201
               |.|..|||.:         ||...|..:::
Zfish   165 ---DKIGEGEFIQGVMENKDILRLIQYDEPKKI 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32812NP_001284770.1 EF-hand_7 31..136 CDD:290234 21/119 (18%)
EF-hand_6 117..139 CDD:290141 5/21 (24%)
rcvrnaNP_001025419.1 FRQ1 13..182 CDD:227455 42/202 (21%)
EFh 65..127 CDD:238008 10/72 (14%)
EFh 101..177 CDD:238008 21/84 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271942at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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