DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32812 and pbo-1

DIOPT Version :10

Sequence 1:NP_569899.3 Gene:CG32812 / 31074 FlyBaseID:FBgn0025642 Length:225 Species:Drosophila melanogaster
Sequence 2:NP_497601.1 Gene:pbo-1 / 175385 WormBaseID:WBGene00003941 Length:196 Species:Caenorhabditis elegans


Alignment Length:205 Identity:51/205 - (24%)
Similarity:91/205 - (44%) Gaps:29/205 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 NPVQLCDHQQ-----ATGLSAEQLEQLHTRFRSLDRHQ-----RGYLTPTDLLRIPQLSLNPLHR 64
            |..|:.:|:.     .:|||...:.:|:.||.||..|:     ..:||..|...|.:|..|||..
 Worm     4 NSSQIPEHELEHLSIESGLSRGGILKLYGRFISLATHRDKTTNEYFLTKGDFQSIAELKQNPLGD 68

  Fly    65 QIIDGFFPSRDPSAR--IGFKQFVDTCSTILVPQFGRGSVRRRDGRVQKLQLLSKMFDTRRSGCI 127
            :|||.||...:...|  :.||.||...|..  ....:......:.|..||:....|:|..:||.|
 Worm    69 RIIDAFFADAEVLERRKVYFKDFVKVLSHF--RPINKNKPHPWNSREAKLRFAFTMYDLNKSGTI 131

  Fly   128 TRSDFRQIMRSIVNLAWSQQQDQERQEGLSENRLPEVEAELQLLEHQAFGFCCDHISYGEFEKRL 192
            |:.:|:.|:..::.:...:.|    ...:::..:.|.:.:       ..||    |::.||...:
 Worm   132 TKDEFQDILAMMIGVGVPKDQ----VNSIADRTMREADRD-------GDGF----ITFQEFCNAM 181

  Fly   193 FSVDVDRRLS 202
            ...|:::::|
 Worm   182 EKTDIEQKMS 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32812NP_569899.3 FRQ1 25..>139 CDD:444056 36/120 (30%)
pbo-1NP_497601.1 FRQ1 49..183 CDD:444056 37/150 (25%)
EFh 115..181 CDD:238008 17/80 (21%)

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