DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11403 and AT1G20750

DIOPT Version :9

Sequence 1:NP_569898.1 Gene:CG11403 / 31072 FlyBaseID:FBgn0026876 Length:861 Species:Drosophila melanogaster
Sequence 2:NP_173498.3 Gene:AT1G20750 / 838665 AraportID:AT1G20750 Length:1144 Species:Arabidopsis thaliana


Alignment Length:876 Identity:187/876 - (21%)
Similarity:299/876 - (34%) Gaps:299/876 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 GAQEFGFPYSPYEIQEQLMQELFQVLERGQ-----VGIFESPTGTGKSLTLTCGALTWLARHEEL 73
            |..:..|||.||..|...|..:...|:|.|     ..:.||||||||||:|.|..|.|       
plant    30 GGLQVEFPYQPYGTQLAFMSRVISTLDRAQRDGHSHALLESPTGTGKSLSLLCSVLAW------- 87

  Fly    74 VRTEMLARIRGVEQELAKLKEESEQSSNWLESQGKSRAQRAELLRLQHLQALLDKQEQQLDQIRK 138
                                                                           :|
plant    88 ---------------------------------------------------------------QK 89

  Fly   139 GAKKHKRQGRVHPGKLEELEKDLDPESDSDSEHETADGPQEAAEDRYRPVQIFFCSRTHSQLAQI 203
            ..|.....|.:...|.:       |...:.|.:.....||...        |::.||||:|:.|:
plant    90 SYKSRFPNGNLSHSKTQ-------PSDIAGSSNVEPHEPQIPT--------IYYASRTHAQITQV 139

  Fly   204 VAELRKTPHGQSVRSISLGSRQQLCGNPAVRKLKHVGLMNERC-LDMATKKARPNPSKKSRLTAE 267
            :.|.|||  |..|....||||::.|.|..|:..::|   :|:| |.:..||              
plant   140 IREYRKT--GYRVPMTVLGSRKRYCTNSHVQGKENV---DEKCRLLLKDKK-------------- 185

  Fly   268 ANSRC-PFKAASLV---ESLRDLALTEPLDIEELANEGTACGGCSYYASRSAVEHAQLILLPYQL 328
             |.:| .|.....:   .||:........|||:|...|....|   ...:|...|:.        
plant   186 -NIKCAEFNGVGRILAYPSLQQTGHNGVHDIEDLVKIGKTVTG---RLLKSFTVHSN-------- 238

  Fly   329 LLQKSARNQLGISLKGSIV------------IVDEAHNLLDSVAQLHGSEISRQQLERAKVQISG 381
             ::..||....|:|:..|:            :..|.::.|..|.:...|.|.|::...||..:  
plant   239 -MEDIAREAGSINLEEDIIFKLKNELEQMSEVEPEIYDSLYEVVEGLISWIGRKKDSLAKRDV-- 300

  Fly   382 YKDHFQKRFTTKNLLKINQIIFIIRRLLKILDQRKELQSNGCSMMRTYELTAEGDFFNIDLCELL 446
              ||:...:|....||                           .::.:.:|.| :|.|:..|   
plant   301 --DHYFSNWTGDRALK---------------------------ELKEFNITRE-NFPNLKAC--- 332

  Fly   447 DFCARTRFARKVQGRADRMEREPRPSENQAPVSTARSLILQRLASEQKLKEKTKSVKRRVEDINK 511
                                      .|||                                |.|
plant   333 --------------------------FNQA--------------------------------ITK 339

  Fly   512 EDKAEELQEQQKPTKKPVEEVAPSPIRPLLAFLETLTSNAEDGRILVDPVGG------------- 563
            .:.||     ..|.|..:..::.|.:..|.|.|....|  .:|..::|...|             
plant   340 SEAAE-----IDPDKPYLSGISVSTLEELFATLTYFFS--RNGSHVLDYEMGLQRSAKRGDNGWT 397

  Fly   564 -TLKYILLDPAEQFADIVAEARAIVIAGGTMQPTKELKEQL---FTGCHDRLVERFYNHVV-AND 623
             |.....::|:..|.|:...:.:|::..||:.|......:|   |..|.:.      .||: .|.
plant   398 NTFSLWCMNPSVVFKDLADLSLSIILTSGTLSPMNSFSSELGMQFGTCLEA------PHVIDPNM 456

  Fly   624 AILPFVISNGPSGAPLSFKFAHRGSAEMLRELSMILRNLCQVVPGGVVCFLPSYEYLDKVYKYLE 688
            .:....||..|...||:..:....:......|...|..:|.:||||.:.|.|||:.::|:.....
plant   457 QVWAGAISTVPGNYPLNASYRTAEAYAFQDALGKSLEEICTIVPGGSLVFFPSYKLMEKLCTRWH 521

  Fly   689 QSGTLETISGRKSVFREVSGSA----EQLLDNY-------------ALAIKRPASY--------- 727
            ::|....:..:..:|.|..|.:    |.:|..|             ..::|:..|.         
plant   522 ETGQWSRLCLKTDLFIEPRGGSKDDFETVLKEYYDSISGKNRLIGRNSSVKKAGSVITEAQDDSK 586

  Fly   728 -GALLLSVVGGKLSEGLNFADDLGRAVLVVGLPYSN--SLSPELRQRMQHLDEK----LGPGAGN 785
             |:..|:|..||:|||::|:||..|||::||:|..|  .:..||:::....::.    ||   |:
plant   587 RGSAFLAVCRGKVSEGMDFSDDNARAVIIVGIPLPNLGDILVELKRKYNDTNKSSKNLLG---GS 648

  Fly   786 EYYENLCVKAVNQCIGRAVRHIKDYACVYLL 816
            |:|.....:|:||..||.:||..||..:..|
plant   649 EWYCQQAYRALNQAAGRCIRHRFDYGAIIFL 679

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11403NP_569898.1 DinG 15..841 CDD:224120 186/875 (21%)
DEXDc2 16..394 CDD:214693 87/399 (22%)
Helicase_C_2 659..836 CDD:290046 55/191 (29%)
AT1G20750NP_173498.3 rad3 31..679 CDD:273169 185/873 (21%)
P-loop_NTPase 32..>227 CDD:304359 68/299 (23%)
Helicase_C_2 492..679 CDD:290046 54/189 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1199
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D186062at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.