DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11403 and brip1

DIOPT Version :10

Sequence 1:NP_569898.1 Gene:CG11403 / 31072 FlyBaseID:FBgn0026876 Length:861 Species:Drosophila melanogaster
Sequence 2:XP_073779429.1 Gene:brip1 / 794038 ZFINID:ZDB-GENE-081107-11 Length:1364 Species:Danio rerio


Alignment Length:1013 Identity:258/1013 - (25%)
Similarity:390/1013 - (38%) Gaps:264/1013 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 TPGAQEFGFPYSPYEIQEQLMQELFQVLERGQVGIFESPTGTGKSLTLTCGALTW---------- 66
            |.|..:..||...|..|..:|..:.:.|..||..:.|||||:||||.|.|.||.|          
Zfish     9 TIGGVKINFPCKAYPSQLAMMNSIIRGLNNGQHCLLESPTGSGKSLALLCSALAWQQAQFVKEQD 73

  Fly    67 ------------------LARHEELVRTEMLARIRGVEQELAKLKEESEQSSNWLESQGKSRAQR 113
                              .|.|....::....|...........:..|.|.:..|...|||...:
Zfish    74 AGTGFADCKKSEVVTPCQCACHSRNAQSTFNTRASRPPTVHLTCEGTSAQPTTPLSKGGKSDQHK 138

  Fly   114 AELL--RL-QHLQALLDKQEQQLDQIRKGAKKHKRQGRVHP-GKLEELEKDLDPESDSDSEHETA 174
            ...|  || :.|||.|:..|.. |..:...|:.:..|.... .|...|||.:....|.|.|.|:.
Zfish   139 KPSLSSRLSEKLQASLNNGEHD-DDFKNDRKRIRTPGTEQKISKRRCLEKGVIYIDDDDEEEESL 202

  Fly   175 DGP-------------------------------------------QEAAE------------DR 184
            :.|                                           |:.||            .:
Zfish   203 ERPVPGAQTWTMELNNGARADSCQSQPQCCSPVSCSLCPCANLKAGQKMAEMSKDNEKDKDGSGK 267

  Fly   185 YRPVQIFFCSRTHSQLAQIVAELRKTPHGQSVRSISLGSRQQLCGNPAVRKLKHVGLMNERCLDM 249
            .:..:|||.:|||.|:.||..||::|.: .:|....|.||...|.:|.|  :.|.. .||||   
Zfish   268 KKIPKIFFGTRTHKQITQIARELKRTLY-STVPMTILSSRDHTCVHPEV--VPHAN-RNERC--- 325

  Fly   250 ATKKARPNPSKKSRLTAEANSRCPFKAASLVESLRDLA-------LTEPLDIEELANEGTACGGC 307
                       |..|.|:....|.:  ...|..:||.:       |.:..|||||...|.....|
Zfish   326 -----------KEFLEAKNGRSCRY--YHNVHKMRDQSTLQWVHGLHQAWDIEELVRLGGKLRSC 377

  Fly   308 SYYASRSAVEHAQLILLPYQLLLQKSARNQLGISLKGSIVIVDEAHNLLDSVAQLHGSEISRQQL 372
            :|||:|..::.|.::..||..||....|..:.|:||..||::|||||:.|...:.....:::.||
Zfish   378 AYYAARELMQEACIVFCPYNYLLDPLIRESMEINLKEQIVVLDEAHNIEDCARESASFTLNQAQL 442

  Fly   373 ERAKVQISGYKDHFQKRFTTKNLLKINQIIFIIRRLLKILDQRKELQSNGCSMMRTYELTAEGDF 437
            ..|:.:|.|...|                  .|||     ||.:.|.:..||:....:.:..|  
Zfish   443 LLARDEIDGMVTH------------------NIRR-----DQHRPLLAFCCSLTNWVQESCGG-- 482

  Fly   438 FNIDLCELLDFCARTRFARKVQGRADRMEREPRPSENQAPVSTA-------RSL--------ILQ 487
                                         .|.|..|:...|.|.       |.|        :||
Zfish   483 -----------------------------LEEREYESSCKVWTGVEVLGIFRGLGITADTFPLLQ 518

  Fly   488 R-LASEQKLKEKTKSVKRRVEDINKEDKAEELQEQQKPTKKPVEEVAPSPIRPLLAFLETLTSN- 550
            : ||:..:.:|:...|..|.|.:            |.||   :.....|.::.|...||.|... 
Zfish   519 KNLAAVLEKEERVGLVNGREETV------------QVPT---ISSNTQSMLKSLFMVLEFLFRQN 568

  Fly   551 ---AEDGRI-------------LVDPVG------------------GTLKYILLDPAEQFADIVA 581
               |:|.|:             |.|..|                  .||.:..|:||..|:|:.:
Zfish   569 CRFADDYRVALQQSYMWTTQQDLPDAQGFFARPHRRRQSNRTKTLVHTLSFWCLNPAVAFSDLSS 633

  Fly   582 EARAIVIAGGTMQPTKELKEQL---FTGCHDRLVERFYNHVVANDAILPFVISNGPSGAPLSFKF 643
            ..|:||:..||:.|......:|   |:      ::...|||:....:....|..||.|..|...|
Zfish   634 TVRSIVLTSGTLSPMGSFSSELGIKFS------IQLEANHVINKSQVWVGTIGAGPQGRKLCATF 692

  Fly   644 AHRGSAEMLRELSMILRNLCQVVPGGVVCFLPSYEYLDKVYKYLEQSGTLETISGRKSVFREVSG 708
            .|..:.....|:..:|..:|..|..||:||||||:.|||:......:|..:.:...|:|..|..|
Zfish   693 QHAETFAFQDEVGALLLKVCHTVSRGVLCFLPSYKMLDKLRDRWTNTGLWDKLEECKTVITEPRG 757

  Fly   709 SA----EQLLDNYALAIKRPASY-----GALLLSVVGGKLSEGLNFADDLGRAVLVVGLPYSNSL 764
            ..    ::||..|..||:..|:.     ||||::|..||:||||:|.||..|||:.:|:|:.|..
Zfish   758 GGKGDFDELLQTYYEAIRGTAAKGEKRDGALLVAVCRGKVSEGLDFTDDNARAVVTIGIPFPNIK 822

  Fly   765 SPELRQRMQHLD---EKLGPGAGNEYYENLCVKAVNQCIGRAVRHIKDYACVYLLDKRF-ADPK- 824
            ..::..:|::.|   :..|...|..:||....:|:||.:||.:||..|:..:.|:|.|| .:|. 
Zfish   823 DLQVELKMKYNDKHAKSRGLLPGGRWYEIQAYRALNQALGRCIRHRNDWGALILVDDRFRTNPNK 887

  Fly   825 -IRGKLPKWISRHIVEANAANGGFGAVQGRTARFFKGR 861
             |.| |.||:.:.:...:...|...:::.    |.:|:
Zfish   888 YITG-LSKWVRQLVRHHDTFTGAMQSLKS----FSQGQ 920

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11403NP_569898.1 DEAD-like_helicase_N 42..>101 CDD:475120 21/86 (24%)
rad3 187..837 CDD:273169 199/725 (27%)
brip1XP_073779429.1 None

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