DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11403 and ddx11

DIOPT Version :10

Sequence 1:NP_569898.1 Gene:CG11403 / 31072 FlyBaseID:FBgn0026876 Length:861 Species:Drosophila melanogaster
Sequence 2:NP_001164296.1 Gene:ddx11 / 493192 XenbaseID:XB-GENE-969935 Length:895 Species:Xenopus tropicalis


Alignment Length:914 Identity:337/914 - (36%)
Similarity:515/914 - (56%) Gaps:103/914 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PGAQEFGFPYSPYEIQEQLMQELFQVLERGQVGIFESPTGTGKSLTLTCGALTWLARHEELVRTE 77
            |.|..|.|||.||.||||.|::|:|.||.|:||||||||||||||:|.|||||||...|...|.|
 Frog     8 PAALTFPFPYEPYPIQEQFMEKLYQALEAGKVGIFESPTGTGKSLSLICGALTWLQDFETKKRQE 72

  Fly    78 MLARIRGVEQELAKLKEESEQSS--NWL--------ESQGKSRAQRAELLRLQHLQALLDKQEQQ 132
            ....:...:.|| |.|:.|..|:  :|:        |...|::.:..:|.|        .|:|:.
 Frog    73 EAQALSVADTEL-KEKDTSASSTEPDWIAQFVQMKEEMDIKNKIKEEQLRR--------KKREEH 128

  Fly   133 LDQIR-----KGAKKHKRQGRVHPGKLEELEK------------DLDPES------DSDSEHETA 174
            |.|::     |.|.|.||:......:|.:|.:            :||.|.      :.:|:.||.
 Frog   129 LKQMKHNVQLKFASKRKREEDDETMRLLQLSQQILSGGGEKEAIELDKEEQELLLVEYESDEETK 193

  Fly   175 DGP-----QEAAEDRYRPVQIFFCSRTHSQLAQIVAELRKTPHGQSVRSISLGSRQQLCGNPAVR 234
            .||     :|..|:.: ..:|::||||||||:|.|.|::|:|.|:..|.:||||||.:|.|..||
 Frog   194 KGPDRLEDEEDLEEEH-VTKIYYCSRTHSQLSQFVHEVQKSPFGKQTRLVSLGSRQNMCVNDDVR 257

  Fly   235 KLKHVGLMNERCLDMAT---KKARPNPSKKSRLTAEANSRCPFKAASLVESLRDLALTEPLDIEE 296
            :|.:|.|:|:||::|..   :|....|.:|.|  .|:.:.|||.:...::.|||..|.|..|||:
 Frog   258 RLGNVQLINDRCMEMQRNKHEKKNKEPERKKR--QESRAACPFYSYEQMQFLRDETLVEVKDIEQ 320

  Fly   297 LANEGTACGGCSYYASRSAVEHAQLILLPYQLLLQKSARNQLGISLKGSIVIVDEAHNLLDSVAQ 361
            |.:.......|.||:||.|:..||:::||||:||.:|:|...||.||..:||:||||||:|::..
 Frog   321 LVSLAREVKACPYYSSRYAIPTAQVVVLPYQMLLHESSRKASGIKLKDQVVIIDEAHNLIDTITC 385

  Fly   362 LHGSEISRQQLERAKVQISGYKDHFQKRFTTKNLLKINQIIFIIRRLLKILDQR-------KELQ 419
            ::.|::|..||.:|..|:..|.|.::.|...|||:.:.|::|::.:.::::...       :::.
 Frog   386 MYSSQVSGAQLCQAHSQLMQYMDRYRSRLKAKNLMYVKQLVFLLEKFVQVMGGNVKQNPSFQKVA 450

  Fly   420 SNGCSMMRTYELTAEGDFFNIDLCELLDFCARTRFARKVQGRADRMEREPRPSENQAPVSTARSL 484
            .:|.::....:........||:|.::..:|.::..:||:.|..::.:.......|:.........
 Frog   451 QDGTTLKSINDFLFHSQIDNINLFKIQRYCTKSMISRKLSGFVEKFKGTETCLANKESQKAGLQQ 515

  Fly   485 ILQRLASEQKLKEKTKSVKRRVEDINKEDKAEELQEQQKPTKKPVEEVAPSPIRPLLAFLETLTS 549
            .||.|:  ||.:....:.:..:||      ||..|.:           ..||:..:..||..||:
 Frog   516 FLQDLS--QKSRHTVGAPEGALED------AENGQLR-----------TASPLMQIEGFLSALTN 561

  Fly   550 NAEDGRILVDPVG----GTLKYILLDPAEQFADIVAEARAIVIAGGTMQPTKELKEQLFTGC--- 607
            ..:|||:::...|    .:||:::|:||..||:::.|.|:::||||||||..:.|:||....   
 Frog   562 ANQDGRVILHMQGTVAQSSLKFLMLNPAVHFAEVLKECRSVIIAGGTMQPVSDFKQQLLISAGLS 626

  Fly   608 HDRLVERFYNHVVANDAILPFVISNGPSGAPLSFKFAHRGSAEMLRELSMILRNLCQVVPGGVVC 672
            .:|:.|....||:..:.|||.|:.:||:...|.|.:..|...||:.|...||.|||..||||:||
 Frog   627 PERITEFSCGHVIPAENILPIVLCSGPTNQQLEFTYQKRDLPEMMDETGRILTNLCNFVPGGLVC 691

  Fly   673 FLPSYEYLDKVYKYLEQSGTLETISGRKSVFREV--SGSAEQLLDNYALAIKR-----PASYGAL 730
            |.|||||..::.::.|:||.|:.::.:|.:|:|.  :...:|:|..|:..||.     .|..|||
 Frog   692 FFPSYEYQKRIQEHWEKSGLLKRLALKKKIFQEPKRANQVDQVLVEYSKCIKNCSQSGGAQNGAL 756

  Fly   731 LLSVVGGKLSEGLNFADDLGRAVLVVGLPYSNSLSPELRQRMQHLDEKL----GPGAGNEYYENL 791
            |.||||||:|||:||:|||||.:::||:||.|..||||:::|.:||:.|    |..||....|||
 Frog   757 LFSVVGGKMSEGINFSDDLGRCIVMVGMPYPNIRSPELQEKMSYLDKTLPKTEGVSAGRVLIENL 821

  Fly   792 CVKAVNQCIGRAVRHIKDYACVYLLDKRFADPKIRGKLPKWI-SRHIVEANAANGGFGAVQGRTA 855
            |:|||||.||||:||..|||.:.|||.|::.|.|.||||:|| |...|:.|     |||......
 Frog   822 CMKAVNQSIGRAIRHRGDYASIVLLDHRYSRPAILGKLPQWIRSSTQVKPN-----FGAAFATIR 881

  Fly   856 RFFK 859
            :||:
 Frog   882 KFFQ 885

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11403NP_569898.1 DEAD-like_helicase_N 42..>101 CDD:475120 32/60 (53%)
rad3 187..837 CDD:273169 255/678 (38%)
ddx11NP_001164296.1 DEXDc 15..>136 CDD:214692 55/129 (43%)
rad3 210..876 CDD:273169 259/691 (37%)

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