DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11403 and chl-1

DIOPT Version :9

Sequence 1:NP_569898.1 Gene:CG11403 / 31072 FlyBaseID:FBgn0026876 Length:861 Species:Drosophila melanogaster
Sequence 2:NP_499295.2 Gene:chl-1 / 176457 WormBaseID:WBGene00010839 Length:830 Species:Caenorhabditis elegans


Alignment Length:872 Identity:302/872 - (34%)
Similarity:472/872 - (54%) Gaps:78/872 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 EFGFPYSPYEIQEQLMQELFQVLERGQVGIFESPTGTGKSLTLTCGALTWLARHEELVRTEMLAR 81
            ||.||:.||:||..||:|:.|.:|:.::|||||||||||||::.|..:|||...|..:.|::..|
 Worm     3 EFSFPFQPYDIQLNLMREIRQCIEQRKIGIFESPTGTGKSLSVLCSTMTWLEAEELRISTDLSTR 67

  Fly    82 IRGVEQELAKLKEESEQSSNWLES-QGKSRAQRAELLRLQHLQALLDKQEQQLDQIRKG----AK 141
            :..|..::.:. ::...:.||..: :.|.|||..|...|:.:|: .::.:.::||.|:|    ::
 Worm    68 LGEVHTKITEC-DKITTADNWETAVREKMRAQDVETEILEQIQS-RERLQSRIDQARRGMVEVSR 130

  Fly   142 KHKRQGR-----VHP----GKLEELEKDLDPESDSDSEHETADGPQEAAEDRYRPVQIFFCSRTH 197
            |.|...|     :.|    ...||...|...|...||:.  .|...|..|...:.::||:.||||
 Worm   131 KRKAPARDTDQFLEPQDEAAPSEEYNNDEKSEKQRDSDF--FDDVDEEEEKPLKCLKIFYASRTH 193

  Fly   198 SQLAQIVAELRKTPHGQSVRSISLGSRQQLCGNPAVRKLKHVGLMNERCLDM---------ATKK 253
            |||.|:..||.||..  ..|.::..||..||.|..|:|||...|:||:|:::         ..:|
 Worm   194 SQLEQLAEELAKTRF--QPRIVTCASRGTLCVNEEVKKLKLNHLINEKCMELRKNGMSEKEKVQK 256

  Fly   254 ARPNPSKKSRLTAEANSRCPFKAASLVESLRDLALTEPL-DIEELANEGTACGGCSYYASRSAVE 317
            .....:||::..|   :.|.|..::.:|.:.:..|:..| ...|::.:|....||.|:|:|.:|.
 Worm   257 LEKGTTKKTKTCA---TSCEFYNSTQIEDVVNGVLSNKLKSTLEVSKQGKLSNGCPYFATRKSVP 318

  Fly   318 HAQLILLPYQLLLQKSARNQLGISLKGSIVIVDEAHNLLDSVAQLHGSEISRQQLERAKVQISGY 382
            ..||:|||||:||....|...||.||.:::::|||||:|::::.|:.:|||.:.|..|...|..|
 Worm   319 QCQLVLLPYQVLLHDGTRKAWGIELKDNVIVLDEAHNVLNTISSLYSAEISTKSLTLALRLIREY 383

  Fly   383 KDHFQKRFTTKNLLKINQIIFIIRRLLKILD-QRKELQSNGCSMMRTYELTAEGDFFNIDLCELL 446
            ..|::.:....|||.:.|:..:..::|..|: |.||      .:|...:|....:...|:|.:|.
 Worm   384 NAHYKLKLLAHNLLYMKQLESLTSKMLIFLNSQSKE------DVMTMAQLARNLNILEINLFKLA 442

  Fly   447 DFCARTRFARKVQGRADRMEREPRPSENQAPVSTARSLILQRLASEQKLKEKTKSVKRRVEDINK 511
            ::..:|...:|..|...|:::|....||:.|          :|...|||        ...::...
 Worm   443 EYMEKTDLCKKFHGFYMRLQKEEIKKENEKP----------KLTGIQKL--------MAAKEAEP 489

  Fly   512 EDKAEELQEQQKPTKKPVEEVAPSPIRPLLAFLETLTSNAEDGRILVD--PVGGTLKYILLDPAE 574
            |.:||.|     |..|||    |||:..|.:|::.||:..|||||:|:  ......:::||:||:
 Worm   490 EPEAEPL-----PPPKPV----PSPLFSLKSFIDALTNKCEDGRIIVEKSATEAKFRFMLLNPAD 545

  Fly   575 QFADIVAEARAIVIAGGTMQPTKELKEQLFTGCHDR-LVERF-YNHVVANDAILPFVISNGPSGA 637
            :.:::|..|||.::.||||:|.:.|.|.|..|.... .:.|| ..||:.:..:|...:.....|.
 Worm   546 RLSEVVTSARATILVGGTMEPAQLLVETLSRGSIGADSIRRFSCCHVIDDSQLLAVTVERTVDGK 610

  Fly   638 PLSFKFAHRGSAEMLRELSMILRNLCQVVPGGVVCFLPSYEYLDKVYKYLEQSGTLETISGRKSV 702
            |....:..||:...||.|:..::.|...:|.|||.|:|||::|....|.:::.|.|:.|..:|:|
 Worm   611 PFQLTYQTRGADTTLRSLATSIQALIPHIPNGVVIFVPSYDFLFNFQKKMKEFGILKRIEEKKAV 675

  Fly   703 FREVSGSAEQLLDNYALAIKRPASYGALLLSVVGGKLSEGLNFADDLGRAVLVVGLPYSNSLSPE 767
            |.|.......:.|.::.|.|  .|.||:|.:|||||:|||:||.|:|||||:|:||||.|..|.|
 Worm   676 FTESRQPTSDVWDRFSRAAK--TSKGAILFAVVGGKMSEGINFCDELGRAVIVIGLPYPNKTSVE 738

  Fly   768 LRQRMQHLDEKLGPGAGNEYYENLCVKAVNQCIGRAVRHIKDYACVYLLDKRFADPKIRGKLPKW 832
            ||:||:.||.:: |..||..||:||:.||||.||||:||.:|||.|||.|.|:|....|.||..|
 Worm   739 LRERMKFLDTQM-PNGGNLLYESLCMHAVNQAIGRAIRHRRDYAAVYLFDDRYAKESTRRKLSTW 802

  Fly   833 ISRHIVEANAANGGFGAVQGRTARFFK 859
            |.    :......|||.:..:|..||:
 Worm   803 IG----DRTQVKLGFGEIIRKTRSFFE 825

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11403NP_569898.1 DinG 15..841 CDD:224120 296/852 (35%)
DEXDc2 16..394 CDD:214693 134/400 (34%)
Helicase_C_2 659..836 CDD:290046 86/176 (49%)
chl-1NP_499295.2 P-loop_NTPase 2..387 CDD:304359 133/392 (34%)
rad3 121..820 CDD:273169 254/745 (34%)
Helicase_C_2 632..803 CDD:290046 84/173 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165690
Domainoid 1 1.000 168 1.000 Domainoid score I2309
eggNOG 1 0.900 - - E1_COG1199
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H68973
Inparanoid 1 1.050 468 1.000 Inparanoid score I845
Isobase 1 0.950 - 0 Normalized mean entropy S1862
OMA 1 1.010 - - QHG57144
OrthoDB 1 1.010 - - D141017at33208
OrthoFinder 1 1.000 - - FOG0003100
OrthoInspector 1 1.000 - - oto20019
orthoMCL 1 0.900 - - OOG6_102316
Panther 1 1.100 - - LDO PTHR11472
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R199
SonicParanoid 1 1.000 - - X2476
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1716.750

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